Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm42459-201ENSMUST00000199679 742 ntBASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Gm18850-201ENSMUST00000211578 388 ntBASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 AC124433.2-201ENSMUST00000223867 291 ntBASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 AC137902.2-201ENSMUST00000227989 576 ntBASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Mir134-201ENSMUST00000083492 71 ntBASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Gm7739-201ENSMUST00000221131 1560 ntBASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ubfd1Q78JW9 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm13733-201ENSMUST00000117290 535 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm15382-201ENSMUST00000118011 537 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm13367-201ENSMUST00000119955 796 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm13815-201ENSMUST00000119963 412 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm7973-201ENSMUST00000122107 488 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm22143-201ENSMUST00000157401 203 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm23546-201ENSMUST00000158211 137 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm23179-201ENSMUST00000158693 304 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm2930-201ENSMUST00000170403 474 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm27039-201ENSMUST00000182438 962 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm28437-201ENSMUST00000190277 783 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm5285-201ENSMUST00000193089 666 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm43596-201ENSMUST00000202818 884 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm43897-201ENSMUST00000204019 309 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm32453-201ENSMUST00000204183 456 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm44727-201ENSMUST00000204225 451 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm45722-201ENSMUST00000213075 466 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Snora30-201ENSMUST00000083325 130 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Mir30b-201ENSMUST00000083542 96 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.07□□□□□ -1.6
Ubfd1Q78JW9 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms