Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm15986-201ENSMUST00000122153 400 ntBASIC4.14□□□□□ -1.75
Spg11Q3UHA3 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC4.14□□□□□ -1.75
Spg11Q3UHA3 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.14□□□□□ -1.75
Spg11Q3UHA3 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Spg11Q3UHA3 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.14□□□□□ -1.75
Spg11Q3UHA3 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Spg11Q3UHA3 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Spg11Q3UHA3 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Spg11Q3UHA3 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Spg11Q3UHA3 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Spg11Q3UHA3 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Spg11Q3UHA3 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Spg11Q3UHA3 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Spg11Q3UHA3 AC156569.1-201ENSMUST00000222020 3841 ntBASIC4.14□□□□□ -1.75
Spg11Q3UHA3 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Spg11Q3UHA3 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm38062-201ENSMUST00000192541 1856 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm26036-201ENSMUST00000158149 144 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm4557-201ENSMUST00000185826 907 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm8708-201ENSMUST00000188500 906 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm5876-201ENSMUST00000203735 243 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm44118-201ENSMUST00000204665 229 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm9712-201ENSMUST00000210842 311 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm6991-201ENSMUST00000218475 1178 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Ube2nl-201ENSMUST00000085228 456 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm42994-201ENSMUST00000195964 2549 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm24068-201ENSMUST00000104513 132 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm23666-201ENSMUST00000158053 116 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm44513-201ENSMUST00000206811 439 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm18320-201ENSMUST00000211304 595 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Gm37018-201ENSMUST00000192441 3869 ntBASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Spg11Q3UHA3 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm43665-201ENSMUST00000198672 1659 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm25539-201ENSMUST00000116886 122 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm45722-201ENSMUST00000213075 466 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm38257-201ENSMUST00000195881 2761 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm10936-201ENSMUST00000105264 252 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm15780-201ENSMUST00000121283 935 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm12412-201ENSMUST00000121867 328 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm26088-201ENSMUST00000157896 131 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm22890-201ENSMUST00000158642 144 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm9722-201ENSMUST00000194568 802 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm18429-201ENSMUST00000198707 421 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Gm10704-201ENSMUST00000098952 730 ntBASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Spg11Q3UHA3 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Spg11Q3UHA3 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
Spg11Q3UHA3 AC113031.7-201ENSMUST00000228609 1928 ntBASIC4.11□□□□□ -1.75
Spg11Q3UHA3 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms