Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm12073-201ENSMUST00000117382 524 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm12311-201ENSMUST00000118803 374 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm12988-201ENSMUST00000119054 478 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm14352-201ENSMUST00000119250 449 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm12231-201ENSMUST00000119447 695 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm8051-201ENSMUST00000120464 466 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm12731-201ENSMUST00000120932 268 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm26993-201ENSMUST00000182766 789 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm9320-201ENSMUST00000184151 473 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm27875-201ENSMUST00000184425 123 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm27387-201ENSMUST00000184583 116 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm20954-201ENSMUST00000189078 644 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm43350-201ENSMUST00000196382 711 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm43309-201ENSMUST00000200837 458 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm6051-201ENSMUST00000201529 352 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm43580-201ENSMUST00000202892 284 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm8319-201ENSMUST00000205708 641 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm45171-201ENSMUST00000206360 736 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm3213-201ENSMUST00000219296 441 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Mir202-201ENSMUST00000083568 72 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 AC122408.2-201ENSMUST00000217901 1391 ntBASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Trafd1Q3UDK1 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Neat1-201ENSMUST00000173672 20771 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Mir105-201ENSMUST00000104655 80 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm12005-201ENSMUST00000121451 379 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm25923-201ENSMUST00000158312 138 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm6214-201ENSMUST00000178845 541 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm43828-201ENSMUST00000196890 639 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm42666-201ENSMUST00000201954 152 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm18258-201ENSMUST00000210413 542 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm18442-201ENSMUST00000220925 639 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 AV026068-224ENSMUST00000224827 928 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm22350-201ENSMUST00000083924 156 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm24031-201ENSMUST00000083930 131 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms