Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm8941-201ENSMUST00000181451 899 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm28724-201ENSMUST00000186149 625 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm18698-201ENSMUST00000192327 668 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm43350-201ENSMUST00000196382 711 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm6362-201ENSMUST00000217686 836 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm8672-201ENSMUST00000221200 332 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 AC154506.3-201ENSMUST00000225417 213 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm25404-201ENSMUST00000082970 107 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm11908-201ENSMUST00000117755 347 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm14769-201ENSMUST00000118590 432 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm12281-201ENSMUST00000119536 298 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm14831-201ENSMUST00000120253 409 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm13537-201ENSMUST00000120467 267 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm24517-201ENSMUST00000122560 107 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm20397-201ENSMUST00000174520 362 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm21754-201ENSMUST00000177550 479 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm27225-201ENSMUST00000183833 557 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm27781-201ENSMUST00000185185 92 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm18728-201ENSMUST00000186155 753 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm28353-201ENSMUST00000186482 570 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm28533-201ENSMUST00000186741 570 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm43444-201ENSMUST00000198123 291 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm43345-201ENSMUST00000199484 269 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm43054-201ENSMUST00000199495 884 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm43384-201ENSMUST00000200569 637 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm43228-201ENSMUST00000200735 264 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm19060-201ENSMUST00000201959 421 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm19617-201ENSMUST00000202977 308 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm43973-201ENSMUST00000203562 210 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm35558-202ENSMUST00000221819 499 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Mir188-201ENSMUST00000083464 68 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms