Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a1Q00780 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a1Q00780 Mir804-201ENSMUST00000103251 95 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm22778-201ENSMUST00000104090 128 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.04□□□□□ -1.6
Col8a1Q00780 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm13469-201ENSMUST00000118231 350 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm14871-201ENSMUST00000119056 194 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm11252-201ENSMUST00000120572 939 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm15786-201ENSMUST00000121079 450 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm24910-201ENSMUST00000157289 272 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm24847-201ENSMUST00000158032 108 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm24860-201ENSMUST00000158457 276 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm20545-201ENSMUST00000174739 210 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm19932-201ENSMUST00000177033 313 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm27679-201ENSMUST00000184612 84 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm38050-201ENSMUST00000191904 238 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm20203-201ENSMUST00000192352 332 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm45082-201ENSMUST00000206082 601 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm44857-201ENSMUST00000208331 196 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 AC174797.3-202ENSMUST00000224578 587 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 AC113031.5-201ENSMUST00000227116 606 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a1Q00780 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a1Q00780 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.04□□□□□ -1.6
Col8a1Q00780 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a1Q00780 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms