Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm10936-201ENSMUST00000105264 252 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm11623-201ENSMUST00000120176 1225 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm12691-201ENSMUST00000120186 456 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PrkdcP97313 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm29031-201ENSMUST00000185316 614 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm29000-201ENSMUST00000185444 614 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm28204-201ENSMUST00000185934 614 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm28290-201ENSMUST00000186505 614 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm28161-201ENSMUST00000186669 614 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm28749-209ENSMUST00000189599 614 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm33163-201ENSMUST00000194504 614 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 n-R5s54-201ENSMUST00000083837 112 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
PrkdcP97313 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PrkdcP97313 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PrkdcP97313 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PrkdcP97313 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm14619-201ENSMUST00000120480 168 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm21232-201ENSMUST00000182187 1006 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm42665-201ENSMUST00000202100 586 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm32381-201ENSMUST00000203192 476 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm23443-201ENSMUST00000082916 128 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm23297-201ENSMUST00000083184 127 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm37831-201ENSMUST00000191685 1787 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PrkdcP97313 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm37342-201ENSMUST00000194588 4965 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PrkdcP97313 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PrkdcP97313 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm5182-201ENSMUST00000217708 6092 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 AC154573.1-201ENSMUST00000225913 4659 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PrkdcP97313 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
PrkdcP97313 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PrkdcP97313 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm14981-201ENSMUST00000117325 943 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm22890-201ENSMUST00000158642 144 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PrkdcP97313 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC2.95□□□□□ -1.94
PrkdcP97313 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm35702-201ENSMUST00000198653 511 ntBASIC2.95□□□□□ -1.94
PrkdcP97313 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PrkdcP97313 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC2.95□□□□□ -1.94
PrkdcP97313 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 AC127371.2-201ENSMUST00000228108 1933 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Mir680-3-201ENSMUST00000102298 87 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm14605-201ENSMUST00000120599 268 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm37343-201ENSMUST00000192542 111 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm9712-201ENSMUST00000210842 311 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 AC125379.1-201ENSMUST00000221928 111 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 AC168059.1-201ENSMUST00000225846 841 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 AC154727.1-201ENSMUST00000226537 499 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm6177-201ENSMUST00000085589 465 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
PrkdcP97313 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PrkdcP97313 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm43185-201ENSMUST00000197507 2775 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm37262-201ENSMUST00000192816 1818 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm43523-201ENSMUST00000197397 2878 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
PrkdcP97313 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm43266-201ENSMUST00000201049 1771 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm11372-201ENSMUST00000117348 570 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm14365-201ENSMUST00000117535 587 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm44690-201ENSMUST00000207984 382 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm8748-201ENSMUST00000211125 587 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PrkdcP97313 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PrkdcP97313 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms