Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm27313-201ENSMUST00000183500 142 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm6717-201ENSMUST00000185549 838 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm29389-201ENSMUST00000191562 352 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm36953-201ENSMUST00000195295 268 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm7492-201ENSMUST00000201745 725 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm17906-201ENSMUST00000202480 901 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm44754-201ENSMUST00000208155 400 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm18644-201ENSMUST00000211458 815 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm45742-201ENSMUST00000212400 433 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC6.82□□□□□ -1.32
Rfx1P48377 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm18113-201ENSMUST00000220630 303 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 AC192334.2-201ENSMUST00000223087 1091 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 AC160958.1-201ENSMUST00000224833 368 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 AC161758.1-201ENSMUST00000226123 310 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Rfx1P48377 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Rfx1P48377 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Rfx1P48377 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Rfx1P48377 AC154184.1-201ENSMUST00000224375 1620 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Rfx1P48377 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Rfx1P48377 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Rfx1P48377 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm13641-201ENSMUST00000117993 473 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Gm15765-201ENSMUST00000118407 910 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Gm11609-201ENSMUST00000121926 793 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC6.81□□□□□ -1.32
Rfx1P48377 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm22236-201ENSMUST00000157093 106 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Gm23069-201ENSMUST00000158240 311 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Gm15970-201ENSMUST00000160623 834 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Gm9294-201ENSMUST00000165198 789 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm22650-201ENSMUST00000175138 105 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Rfx1P48377 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm2623-201ENSMUST00000199229 286 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Gm7380-201ENSMUST00000211599 466 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Gm5055-201ENSMUST00000215697 581 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC6.81□□□□□ -1.32
Rfx1P48377 AC133101.1-201ENSMUST00000226939 1199 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 AC122034.1-201ENSMUST00000227641 595 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Rfx1P48377 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Rfx1P48377 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Rfx1P48377 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.81□□□□□ -1.32
Rfx1P48377 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Gm14415-201ENSMUST00000118260 1578 ntBASIC6.81□□□□□ -1.32
Rfx1P48377 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms