Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm12520-201ENSMUST00000117493 316 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm13815-201ENSMUST00000119963 412 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm14619-201ENSMUST00000120480 168 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC5.54□□□□□ -1.52
Traf1P39428 Gm23171-201ENSMUST00000157159 264 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm25271-201ENSMUST00000157273 290 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Traf1P39428 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Traf1P39428 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Traf1P39428 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.54□□□□□ -1.52
Traf1P39428 Gm18828-202ENSMUST00000181035 310 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm23925-202ENSMUST00000188429 132 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm29475-201ENSMUST00000190767 312 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC5.54□□□□□ -1.52
Traf1P39428 Gm9238-201ENSMUST00000196181 329 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm18100-201ENSMUST00000200897 452 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.54□□□□□ -1.52
Traf1P39428 Gm19761-201ENSMUST00000205372 391 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm44757-201ENSMUST00000206373 157 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm45610-201ENSMUST00000209227 784 ntBASIC5.54□□□□□ -1.52
Traf1P39428 AC173345.3-201ENSMUST00000221245 1093 ntBASIC5.54□□□□□ -1.52
Traf1P39428 AC123534.1-201ENSMUST00000224060 656 ntBASIC5.54□□□□□ -1.52
Traf1P39428 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.54□□□□□ -1.52
Traf1P39428 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Traf1P39428 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Traf1P39428 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Traf1P39428 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Olfr881-201ENSMUST00000074611 948 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm25007-201ENSMUST00000083808 133 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Traf1P39428 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Traf1P39428 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Traf1P39428 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Traf1P39428 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Traf1P39428 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Traf1P39428 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Traf1P39428 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.53□□□□□ -1.52
Traf1P39428 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Traf1P39428 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.53□□□□□ -1.52
Traf1P39428 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Traf1P39428 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.53□□□□□ -1.52
Traf1P39428 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Traf1P39428 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Traf1P39428 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.53□□□□□ -1.52
Traf1P39428 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.53□□□□□ -1.52
Traf1P39428 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5.53□□□□□ -1.52
Traf1P39428 Gm12332-201ENSMUST00000121397 922 ntBASIC5.53□□□□□ -1.52
Traf1P39428 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Traf1P39428 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.53□□□□□ -1.52
Traf1P39428 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Traf1P39428 Gm23906-201ENSMUST00000157573 128 ntBASIC5.53□□□□□ -1.52
Traf1P39428 Gm16318-201ENSMUST00000162402 601 ntBASIC5.53□□□□□ -1.52
Traf1P39428 Gm17421-201ENSMUST00000167845 674 ntBASIC5.53□□□□□ -1.52
Traf1P39428 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Traf1P39428 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Traf1P39428 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.53□□□□□ -1.52
Traf1P39428 Gm8458-201ENSMUST00000196658 819 ntBASIC5.53□□□□□ -1.52
Traf1P39428 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.53□□□□□ -1.52
Traf1P39428 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Traf1P39428 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Traf1P39428 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Traf1P39428 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Traf1P39428 Gm24166-201ENSMUST00000082724 135 ntBASIC5.53□□□□□ -1.52
Traf1P39428 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Traf1P39428 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Traf1P39428 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Traf1P39428 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Traf1P39428 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Traf1P39428 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.52□□□□□ -1.53
Traf1P39428 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Traf1P39428 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Traf1P39428 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Traf1P39428 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Traf1P39428 Gm11631-201ENSMUST00000119220 156 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Gm25290-201ENSMUST00000122796 144 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.52□□□□□ -1.53
Traf1P39428 Mir1947-201ENSMUST00000158235 85 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Gm22764-201ENSMUST00000158370 92 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Gm22177-201ENSMUST00000175002 158 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Gm26950-201ENSMUST00000182734 498 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Gm9320-201ENSMUST00000184151 473 ntBASIC5.52□□□□□ -1.53
Traf1P39428 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Traf1P39428 Gm20203-201ENSMUST00000192352 332 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Gm37908-201ENSMUST00000195828 470 ntBASIC5.52□□□□□ -1.53
Traf1P39428 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.52□□□□□ -1.53
Traf1P39428 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Gm45474-201ENSMUST00000209471 408 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Gm8748-201ENSMUST00000211125 587 ntBASIC5.52□□□□□ -1.53
Traf1P39428 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Gm4928-201ENSMUST00000219622 850 ntBASIC5.52□□□□□ -1.53
Traf1P39428 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.52□□□□□ -1.53
Traf1P39428 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Traf1P39428 Ube2nl-201ENSMUST00000085228 456 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.52□□□□□ -1.53
Traf1P39428 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms