Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.87□□□□□ -1.63
Lire1P11260 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Lire1P11260 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 Gm23746-201ENSMUST00000104229 125 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 Gm11625-201ENSMUST00000119535 296 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm14175-201ENSMUST00000119835 241 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm15490-201ENSMUST00000119894 387 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm15828-201ENSMUST00000119911 522 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm14516-201ENSMUST00000120012 252 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm14620-201ENSMUST00000120656 383 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm11825-201ENSMUST00000120710 736 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 Gm25383-201ENSMUST00000157810 144 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm17086-201ENSMUST00000171346 484 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm26731-201ENSMUST00000180683 543 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Mir7056-201ENSMUST00000183776 59 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.87□□□□□ -1.63
Lire1P11260 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.87□□□□□ -1.63
Lire1P11260 Gm37215-201ENSMUST00000194927 1259 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC4.87□□□□□ -1.63
Lire1P11260 Gm29755-201ENSMUST00000196976 948 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm3010-201ENSMUST00000198805 448 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm43036-201ENSMUST00000200594 373 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm18011-201ENSMUST00000203717 565 ntBASIC4.87□□□□□ -1.63
Lire1P11260 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm7530-201ENSMUST00000218466 605 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm40692-201ENSMUST00000220411 491 ntBASIC4.87□□□□□ -1.63
Lire1P11260 AC139294.2-201ENSMUST00000227159 285 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Lire1P11260 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.87□□□□□ -1.63
Lire1P11260 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Lire1P11260 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Lire1P11260 Gm25187-201ENSMUST00000083906 133 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Lire1P11260 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Lire1P11260 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Lire1P11260 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm7919-201ENSMUST00000202043 1389 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.87□□□□□ -1.63
Lire1P11260 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lire1P11260 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.87□□□□□ -1.63
Lire1P11260 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Lire1P11260 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Lire1P11260 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Lire1P11260 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Lire1P11260 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Lire1P11260 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Gm22676-201ENSMUST00000116972 129 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Gm12073-201ENSMUST00000117382 524 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Gm7421-201ENSMUST00000119298 639 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Gm14472-201ENSMUST00000119815 282 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Gm15803-201ENSMUST00000120118 394 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Gm7365-201ENSMUST00000120877 639 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Lire1P11260 Gm12317-201ENSMUST00000122307 319 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC4.86□□□□□ -1.63
Lire1P11260 Gm16331-201ENSMUST00000144274 498 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.86□□□□□ -1.63
Lire1P11260 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Lire1P11260 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.86□□□□□ -1.63
Lire1P11260 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Lire1P11260 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.86□□□□□ -1.63
Lire1P11260 Gm27025-201ENSMUST00000182392 942 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Mir6343-201ENSMUST00000183584 84 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Lire1P11260 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4.86□□□□□ -1.63
Lire1P11260 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Lire1P11260 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.86□□□□□ -1.63
Lire1P11260 Gm7182-201ENSMUST00000193351 732 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Lire1P11260 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC4.86□□□□□ -1.63
Lire1P11260 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Lire1P11260 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.86□□□□□ -1.63
Lire1P11260 Gm45498-201ENSMUST00000210346 283 ntBASIC4.86□□□□□ -1.63
Lire1P11260 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.86□□□□□ -1.63
Lire1P11260 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.86□□□□□ -1.63
Lire1P11260 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.86□□□□□ -1.63
Lire1P11260 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC4.86□□□□□ -1.63
Lire1P11260 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Lire1P11260 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Lire1P11260 Gm22807-201ENSMUST00000082737 129 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Lire1P11260 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms