Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm9285-201ENSMUST00000177691 697 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm25156-201ENSMUST00000179809 79 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm23523-201ENSMUST00000180190 107 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm10136-201ENSMUST00000183196 435 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm27165-201ENSMUST00000183951 232 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm37349-201ENSMUST00000194205 624 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Ighv8-3-201ENSMUST00000194985 295 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm43601-201ENSMUST00000196294 945 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm43286-201ENSMUST00000197420 424 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm18482-201ENSMUST00000202405 760 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.29□□□□□ -1.56
Hoxd3P09027 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 CT030166.2-201ENSMUST00000222021 368 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm9267-201ENSMUST00000222831 404 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 AC138329.1-201ENSMUST00000225040 471 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 AC154640.1-202ENSMUST00000227828 496 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Mir135a-1-201ENSMUST00000083473 90 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm42630-201ENSMUST00000195908 3448 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm44186-201ENSMUST00000204118 2752 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm21379-201ENSMUST00000179772 1955 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 AC139758.3-201ENSMUST00000226853 2704 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 CT025566.1-202ENSMUST00000224800 2511 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm42577-201ENSMUST00000201367 3211 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.29□□□□□ -1.56
Hoxd3P09027 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxd3P09027 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Snord88a-201ENSMUST00000116723 90 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm12573-201ENSMUST00000118158 286 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm13122-201ENSMUST00000118380 453 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm11229-201ENSMUST00000121993 437 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm12929-201ENSMUST00000122406 370 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm12504-202ENSMUST00000148026 306 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm23411-201ENSMUST00000157988 62 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Ear-ps8-201ENSMUST00000161935 354 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm28413-201ENSMUST00000189369 291 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm29192-201ENSMUST00000190942 377 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm43717-201ENSMUST00000198684 310 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm5284-201ENSMUST00000199053 903 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm43089-201ENSMUST00000199162 275 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm43393-201ENSMUST00000200147 194 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm7041-201ENSMUST00000201227 524 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm44162-201ENSMUST00000203543 544 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 AC171206.2-201ENSMUST00000215252 389 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.28□□□□□ -1.56
Hoxd3P09027 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC5.28□□□□□ -1.56
Hoxd3P09027 CT572985.2-201ENSMUST00000220496 211 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 AC165157.3-201ENSMUST00000220815 103 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm7252-201ENSMUST00000223284 456 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hoxd3P09027 mt-Ti-201ENSMUST00000082393 69 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms