Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm37636-201ENSMUST00000193583 359 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm42843-201ENSMUST00000196328 3616 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm43491-201ENSMUST00000197133 784 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC3.57□□□□□ -1.84
Hmgb3O54879 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm45026-201ENSMUST00000205292 833 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Hmgb3O54879 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm44683-201ENSMUST00000209088 484 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm19269-201ENSMUST00000211401 804 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hmgb3O54879 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm19256-201ENSMUST00000218550 231 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 AC164315.1-201ENSMUST00000226452 708 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Hmgb3O54879 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm23510-201ENSMUST00000083083 163 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Hmgb3O54879 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Hmgb3O54879 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Hmgb3O54879 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Hmgb3O54879 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Hmgb3O54879 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Hmgb3O54879 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm12734-201ENSMUST00000120228 948 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm6027-201ENSMUST00000121467 756 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm24774-201ENSMUST00000157384 134 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm25923-201ENSMUST00000158312 138 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm4222-201ENSMUST00000165784 470 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Mir7046-201ENSMUST00000183435 66 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm5511-201ENSMUST00000189380 802 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm45359-201ENSMUST00000210635 427 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm45857-201ENSMUST00000212207 356 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 CT485612.3-201ENSMUST00000222179 408 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 AC192088.3-201ENSMUST00000227858 831 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Hmgb3O54879 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm23514-201ENSMUST00000082827 130 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm25187-201ENSMUST00000083906 133 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm23796-201ENSMUST00000084011 160 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm38106-201ENSMUST00000194107 2534 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm43594-201ENSMUST00000201153 3442 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm43319-201ENSMUST00000198036 2270 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Hmgb3O54879 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.56□□□□□ -1.84
Hmgb3O54879 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm37764-201ENSMUST00000194664 2150 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Hmgb3O54879 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm24230-201ENSMUST00000104313 129 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm12285-201ENSMUST00000117347 233 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm13785-201ENSMUST00000119099 690 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm11262-201ENSMUST00000119326 833 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms