Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm43209-201ENSMUST00000198949 1588 ntBASIC2.48□□□□□ -2.01
Herc1E9PZP8 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm7241-201ENSMUST00000159853 357 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm29704-201ENSMUST00000196011 253 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm8069-201ENSMUST00000197887 154 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm44879-201ENSMUST00000207007 503 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm45628-201ENSMUST00000210849 274 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm9370-201ENSMUST00000222787 609 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 AC131068.3-201ENSMUST00000228438 1456 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm37527-201ENSMUST00000192406 3547 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm38082-201ENSMUST00000192800 6882 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm24318-201ENSMUST00000104490 131 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm14082-201ENSMUST00000118582 801 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm29072-201ENSMUST00000191149 678 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm37001-201ENSMUST00000193377 190 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm37173-201ENSMUST00000194498 1017 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm43891-201ENSMUST00000205132 3112 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm38101-201ENSMUST00000193484 3557 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm37777-201ENSMUST00000195546 3366 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm38259-201ENSMUST00000194602 3534 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm37814-201ENSMUST00000195820 3644 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm8569-201ENSMUST00000117630 647 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 CT009733.2-202ENSMUST00000224171 4748 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 2900026A02Rik-202ENSMUST00000211733 10238 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 AC121997.2-203ENSMUST00000228613 4192 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm37183-201ENSMUST00000191712 3405 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm37621-201ENSMUST00000194716 5531 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm14647-201ENSMUST00000119392 680 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm12691-201ENSMUST00000120186 456 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm23867-201ENSMUST00000122649 274 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm3191-201ENSMUST00000167139 346 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Herc1E9PZP8 Gm44519-201ENSMUST00000206486 122 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 AL669916.5-201ENSMUST00000214874 361 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 AC127270.2-201ENSMUST00000221337 247 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 AC140209.1-204ENSMUST00000226736 739 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Herc1E9PZP8 AC135669.2-201ENSMUST00000215636 4958 ntBASIC2.47□□□□□ -2.01
Herc1E9PZP8 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
Herc1E9PZP8 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
Herc1E9PZP8 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
Herc1E9PZP8 Gm25765-201ENSMUST00000104100 132 ntBASIC2.46□□□□□ -2.02
Herc1E9PZP8 Gm15060-201ENSMUST00000119550 948 ntBASIC2.46□□□□□ -2.02
Herc1E9PZP8 Gm16021-201ENSMUST00000121176 219 ntBASIC2.46□□□□□ -2.02
Herc1E9PZP8 Gm12322-201ENSMUST00000121605 389 ntBASIC2.46□□□□□ -2.02
Herc1E9PZP8 Gm14402-201ENSMUST00000122217 508 ntBASIC2.46□□□□□ -2.02
Herc1E9PZP8 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Herc1E9PZP8 Gm9569-201ENSMUST00000187492 787 ntBASIC2.46□□□□□ -2.02
Herc1E9PZP8 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.46□□□□□ -2.02
Herc1E9PZP8 Gm44681-201ENSMUST00000208447 842 ntBASIC2.46□□□□□ -2.02
Herc1E9PZP8 AC133203.2-201ENSMUST00000226709 464 ntBASIC2.46□□□□□ -2.02
Herc1E9PZP8 Gm9911-201ENSMUST00000211467 2802 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms