Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a4A2AX52 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Gm18120-201ENSMUST00000220079 511 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Snora30-201ENSMUST00000083325 130 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Gm43085-201ENSMUST00000202859 3132 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Gm44894-201ENSMUST00000205280 2174 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Gm37780-201ENSMUST00000194117 1873 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a4A2AX52 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Gm24503-201ENSMUST00000158454 135 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Gm24553-201ENSMUST00000158653 131 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Gm9245-201ENSMUST00000200528 983 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 AC154296.3-201ENSMUST00000214427 712 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Gm8137-201ENSMUST00000218997 463 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Gm3086-202ENSMUST00000221248 310 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 AC165092.2-201ENSMUST00000224681 368 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Gm45517-201ENSMUST00000209973 2468 ntBASIC3.66□□□□□ -1.82
Col6a4A2AX52 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
Col6a4A2AX52 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm26814-201ENSMUST00000181178 4149 ntBASIC3.65□□□□□ -1.82
Col6a4A2AX52 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 CT009734.1-201ENSMUST00000227657 1687 ntBASIC3.65□□□□□ -1.82
Col6a4A2AX52 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 CT030184.2-201ENSMUST00000223064 263 ntBASIC3.65□□□□□ -1.82
Col6a4A2AX52 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm7808-201ENSMUST00000082002 387 ntBASIC3.65□□□□□ -1.82
Col6a4A2AX52 Gm37569-201ENSMUST00000192111 1722 ntBASIC3.65□□□□□ -1.82
Col6a4A2AX52 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col6a4A2AX52 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Col6a4A2AX52 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col6a4A2AX52 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col6a4A2AX52 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Col6a4A2AX52 AC169985.1-201ENSMUST00000223648 2439 ntBASIC3.65□□□□□ -1.83
Col6a4A2AX52 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Col6a4A2AX52 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC3.65□□□□□ -1.83
Col6a4A2AX52 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.65□□□□□ -1.83
Col6a4A2AX52 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC3.65□□□□□ -1.83
Col6a4A2AX52 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC3.65□□□□□ -1.83
Col6a4A2AX52 AC154239.2-201ENSMUST00000227859 233 ntBASIC3.65□□□□□ -1.83
Col6a4A2AX52 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col6a4A2AX52 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col6a4A2AX52 Gm26996-201ENSMUST00000204418 1359 ntBASIC3.65□□□□□ -1.83
Col6a4A2AX52 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Col6a4A2AX52 AC129085.3-201ENSMUST00000225686 1705 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm11631-201ENSMUST00000119220 156 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm8023-201ENSMUST00000195298 903 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm7380-201ENSMUST00000211599 466 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm37831-201ENSMUST00000191685 1787 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm43266-201ENSMUST00000201049 1771 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm43696-201ENSMUST00000199385 6071 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms