Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm13484-201ENSMUST00000120738 412 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm13471-201ENSMUST00000122057 433 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm28190-201ENSMUST00000189766 722 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm37727-201ENSMUST00000191637 819 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm18340-201ENSMUST00000196342 609 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm43315-201ENSMUST00000198120 313 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm35648-201ENSMUST00000202304 475 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm18587-201ENSMUST00000213736 841 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 AC112274.2-201ENSMUST00000218436 170 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm9628-201ENSMUST00000222169 725 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 AC160962.2-201ENSMUST00000224761 632 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 CT030662.1-201ENSMUST00000227380 232 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 AC107711.2-203ENSMUST00000227827 762 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm7117-201ENSMUST00000071515 387 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm5185-201ENSMUST00000080271 619 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm24319-201ENSMUST00000083389 107 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.71□□□□□ -1.66
H2afb3S4R1G7 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm42614-201ENSMUST00000198724 1554 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Mir804-201ENSMUST00000103251 95 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm15185-201ENSMUST00000117397 746 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm12230-201ENSMUST00000118301 454 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm15034-201ENSMUST00000120043 349 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm15388-201ENSMUST00000121578 726 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm24517-201ENSMUST00000122560 107 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm23121-201ENSMUST00000157653 173 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm22555-201ENSMUST00000157801 62 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm25489-201ENSMUST00000158727 141 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm22252-201ENSMUST00000179316 79 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm27266-201ENSMUST00000184521 123 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm9443-201ENSMUST00000188406 816 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm28788-201ENSMUST00000189717 375 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm29558-201ENSMUST00000190134 375 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm37492-201ENSMUST00000191948 376 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm38261-201ENSMUST00000192608 316 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm42522-201ENSMUST00000196071 255 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm42666-201ENSMUST00000201954 152 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.7□□□□□ -1.66
H2afb3S4R1G7 Gm18729-201ENSMUST00000217230 621 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms