Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.06□□□□□ -1.6
Vps28Q9D1C8 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm15933-201ENSMUST00000117215 616 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm11822-201ENSMUST00000119177 415 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm14554-201ENSMUST00000119548 661 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm16463-201ENSMUST00000120527 721 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm15227-201ENSMUST00000121844 399 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm14800-201ENSMUST00000122084 1272 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm26404-201ENSMUST00000158498 109 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm17063-201ENSMUST00000168135 456 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm20056-201ENSMUST00000194813 519 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm36954-201ENSMUST00000195362 363 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm43967-201ENSMUST00000203787 301 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm43919-201ENSMUST00000204303 364 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm8999-201ENSMUST00000204951 969 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm7128-201ENSMUST00000211639 533 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm6906-201ENSMUST00000218014 569 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Mir134-201ENSMUST00000083492 71 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm23102-201ENSMUST00000083724 116 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vps28Q9D1C8 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm8145-201ENSMUST00000118220 745 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm12231-201ENSMUST00000119447 695 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm12704-201ENSMUST00000119789 464 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm12332-201ENSMUST00000121397 922 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm14977-201ENSMUST00000121626 812 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm23205-201ENSMUST00000158671 103 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm8214-201ENSMUST00000172123 351 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm18595-201ENSMUST00000175736 1068 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm21241-201ENSMUST00000179551 934 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm27039-201ENSMUST00000182438 962 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm21803-201ENSMUST00000188897 693 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm20819-201ENSMUST00000191091 925 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm20871-201ENSMUST00000191322 931 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms