Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm17991-201ENSMUST00000208139 297 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm16335-201ENSMUST00000077495 309 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm23970-201ENSMUST00000083319 107 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm11898-201ENSMUST00000117161 385 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm7834-201ENSMUST00000117560 437 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm11881-201ENSMUST00000119408 572 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm15266-201ENSMUST00000119635 255 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm11679-201ENSMUST00000121830 779 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm11692-201ENSMUST00000122121 902 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm14651-201ENSMUST00000147192 442 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm24910-201ENSMUST00000157289 272 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm26372-201ENSMUST00000157831 236 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm17142-201ENSMUST00000164933 645 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm25942-201ENSMUST00000180080 110 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm18802-201ENSMUST00000186270 888 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm28802-201ENSMUST00000188624 944 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm34768-201ENSMUST00000193884 565 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm43717-201ENSMUST00000198684 310 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm2926-201ENSMUST00000205625 239 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm45870-201ENSMUST00000211269 601 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm7495-201ENSMUST00000215099 426 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm336-201ENSMUST00000186376 1480 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.24□□□□□ -1.57
Clrn1Q8K445 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Clrn1Q8K445 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm26078-201ENSMUST00000104067 128 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Mir465c-2-201ENSMUST00000104757 81 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm15044-201ENSMUST00000120703 598 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm9593-201ENSMUST00000166034 469 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms