Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm43312-201ENSMUST00000201655 2466 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm27942-201ENSMUST00000184669 101 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm9569-201ENSMUST00000187492 787 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm28957-201ENSMUST00000190174 373 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm43768-201ENSMUST00000198380 1258 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm43228-201ENSMUST00000200735 264 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm18482-201ENSMUST00000202405 760 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm44128-201ENSMUST00000204909 219 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 AC131720.3-201ENSMUST00000219113 275 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Nsa2-203ENSMUST00000225410 974 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 AC121114.1-201ENSMUST00000228522 570 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 n-R5s86-201ENSMUST00000083215 119 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Gm42869-201ENSMUST00000199953 2121 ntBASIC6.01□□□□□ -1.45
Brf1Q8CFK2 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm16394-201ENSMUST00000117289 675 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm11313-201ENSMUST00000118779 432 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm23318-201ENSMUST00000158000 108 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm5777-201ENSMUST00000177265 448 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm21617-201ENSMUST00000188297 691 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC6□□□□□ -1.45
Brf1Q8CFK2 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm44727-201ENSMUST00000204225 451 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC6□□□□□ -1.45
Brf1Q8CFK2 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 AC123061.2-201ENSMUST00000226234 802 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Mir31-201ENSMUST00000083474 106 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm3978-201ENSMUST00000163406 2512 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Gm37400-201ENSMUST00000193148 3605 ntBASIC6□□□□□ -1.45
Brf1Q8CFK2 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Brf1Q8CFK2 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms