Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Foxc1Q61572 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Foxc1Q61572 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm22438-201ENSMUST00000104049 132 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm17170-201ENSMUST00000112785 316 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm15105-201ENSMUST00000117777 204 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm8421-201ENSMUST00000119439 305 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm5384-201ENSMUST00000120313 463 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm14531-201ENSMUST00000120845 285 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm14787-201ENSMUST00000121236 388 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm11581-201ENSMUST00000122024 763 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm24750-201ENSMUST00000157843 104 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm25048-201ENSMUST00000158598 91 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm22642-201ENSMUST00000175352 252 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm22633-201ENSMUST00000179834 107 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm26731-201ENSMUST00000180683 543 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm28620-201ENSMUST00000190463 439 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm38098-201ENSMUST00000194115 241 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm35108-201ENSMUST00000194321 699 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm33191-201ENSMUST00000195604 699 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm42570-201ENSMUST00000195937 292 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm19418-201ENSMUST00000197436 580 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm21054-201ENSMUST00000203981 380 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC5.18□□□□□ -1.58
Foxc1Q61572 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm8058-201ENSMUST00000217247 587 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm23460-201ENSMUST00000083258 109 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm42885-201ENSMUST00000200763 4214 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.18□□□□□ -1.58
Foxc1Q61572 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Foxc1Q61572 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Foxc1Q61572 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Foxc1Q61572 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Foxc1Q61572 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Foxc1Q61572 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.17□□□□□ -1.58
Foxc1Q61572 AC122426.2-201ENSMUST00000216522 2947 ntBASIC5.17□□□□□ -1.58
Foxc1Q61572 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Foxc1Q61572 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC5.17□□□□□ -1.58
Foxc1Q61572 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Foxc1Q61572 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxc1Q61572 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxc1Q61572 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxc1Q61572 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Foxc1Q61572 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Foxc1Q61572 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Foxc1Q61572 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.17□□□□□ -1.58
Foxc1Q61572 AC154270.2-201ENSMUST00000226755 2306 ntBASIC5.17□□□□□ -1.58
Foxc1Q61572 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxc1Q61572 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Foxc1Q61572 Gm10568-201ENSMUST00000193244 1634 ntBASIC5.17□□□□□ -1.58
Foxc1Q61572 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxc1Q61572 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Foxc1Q61572 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms