Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm19552-201ENSMUST00000194744 2833 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 AC107232.1-201ENSMUST00000227785 1503 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 n-R5s82-201ENSMUST00000104213 109 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm22019-201ENSMUST00000104359 96 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm12638-201ENSMUST00000119531 298 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm11344-201ENSMUST00000122011 335 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm24905-201ENSMUST00000158129 104 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm23545-201ENSMUST00000158205 104 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm22839-201ENSMUST00000158436 304 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm28995-201ENSMUST00000186625 261 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm37758-201ENSMUST00000194275 629 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm33973-201ENSMUST00000195148 534 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm38670-201ENSMUST00000199248 77 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm5306-201ENSMUST00000203325 757 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 AC124549.1-201ENSMUST00000225912 333 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 AC122341.1-201ENSMUST00000227291 560 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm37685-201ENSMUST00000193507 2177 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm9403-201ENSMUST00000196299 2181 ntBASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trim41Q5NCC3 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm44229-201ENSMUST00000203211 2487 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm23485-201ENSMUST00000104181 155 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm12040-201ENSMUST00000118357 537 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Mup-ps18-201ENSMUST00000120145 531 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm6541-201ENSMUST00000165542 561 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm24369-201ENSMUST00000175387 96 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm5372-201ENSMUST00000187540 409 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Scgb2b6-201ENSMUST00000188132 330 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm17934-201ENSMUST00000192818 422 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm5983-201ENSMUST00000197739 770 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm43456-201ENSMUST00000202519 457 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Gm44523-201ENSMUST00000205616 417 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 CT030175.1-201ENSMUST00000220822 408 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 AC102291.2-201ENSMUST00000228083 367 ntBASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC10.79□□□□□ -0.68
Trim41Q5NCC3 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm43022-201ENSMUST00000197067 4268 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Thap6-201ENSMUST00000191860 3151 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm5084-202ENSMUST00000224064 3609 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm14681-201ENSMUST00000118047 411 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm14731-201ENSMUST00000119216 376 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms