Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm15795-201ENSMUST00000160969 553 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm10074-201ENSMUST00000174543 249 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm8321-201ENSMUST00000181691 980 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm28639-201ENSMUST00000191519 481 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm36997-201ENSMUST00000195090 707 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm43308-201ENSMUST00000197236 373 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm45689-201ENSMUST00000210522 133 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 CT025598.1-201ENSMUST00000225140 427 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Mir215-201ENSMUST00000083628 112 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Mir7-2-201ENSMUST00000083675 97 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm23274-201ENSMUST00000104056 130 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm12311-201ENSMUST00000118803 374 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm16106-201ENSMUST00000119187 294 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm12244-201ENSMUST00000119500 291 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm8061-201ENSMUST00000122380 350 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm25447-201ENSMUST00000158997 128 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm3008-201ENSMUST00000160566 571 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm17142-201ENSMUST00000164933 645 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm17063-201ENSMUST00000168135 456 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Mir3097-201ENSMUST00000175356 67 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm18415-201ENSMUST00000177464 647 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Mrgpra14-201ENSMUST00000189782 913 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Ighv8-1-201ENSMUST00000194897 291 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm44403-201ENSMUST00000198554 129 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm43136-201ENSMUST00000200403 636 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm2522-201ENSMUST00000204280 322 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm44776-201ENSMUST00000207212 381 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm19269-201ENSMUST00000211401 804 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm21089-201ENSMUST00000215843 325 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 AC153801.1-201ENSMUST00000217904 947 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm19195-201ENSMUST00000222018 511 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Zmym2-202ENSMUST00000223669 1281 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 AL671874.1-201ENSMUST00000223746 1123 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm4963-201ENSMUST00000072718 378 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm23972-201ENSMUST00000083322 165 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim40Q3UWA4 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim40Q3UWA4 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms