Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.54□□□□□ -1.68
Trafd1Q3UDK1 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trafd1Q3UDK1 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm15120-201ENSMUST00000120602 301 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm17152-201ENSMUST00000172430 535 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm28439-201ENSMUST00000187714 876 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm37684-201ENSMUST00000192779 355 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm37601-201ENSMUST00000194922 394 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Mir5121-201ENSMUST00000198528 74 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm32308-201ENSMUST00000203053 280 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 AC126554.4-201ENSMUST00000221055 409 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trafd1Q3UDK1 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.53□□□□□ -1.69
Trafd1Q3UDK1 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
Trafd1Q3UDK1 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.53□□□□□ -1.69
Trafd1Q3UDK1 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Fus-202ENSMUST00000079045 2623 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm13532-201ENSMUST00000120373 240 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm14957-201ENSMUST00000121069 817 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm25665-201ENSMUST00000157695 110 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm24751-201ENSMUST00000157844 102 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm23897-201ENSMUST00000158110 158 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm26034-201ENSMUST00000158154 116 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm15795-201ENSMUST00000160969 553 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm27036-201ENSMUST00000182465 980 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm27690-201ENSMUST00000184596 126 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm4412-201ENSMUST00000186660 433 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm23925-202ENSMUST00000188429 132 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm44054-201ENSMUST00000203814 372 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm44548-201ENSMUST00000208929 192 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm46369-201ENSMUST00000221577 401 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.52□□□□□ -1.69
Trafd1Q3UDK1 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms