Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Mir190b-201ENSMUST00000104803 80 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm14756-201ENSMUST00000116395 240 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm22091-201ENSMUST00000116908 127 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm14106-201ENSMUST00000119382 438 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm14939-201ENSMUST00000120347 680 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm23883-201ENSMUST00000122686 290 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm22038-201ENSMUST00000157277 242 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm24477-201ENSMUST00000157438 103 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm22080-201ENSMUST00000157591 106 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Scarna6-201ENSMUST00000158656 265 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Mir6412-201ENSMUST00000184477 97 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm28190-201ENSMUST00000189766 722 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm37946-201ENSMUST00000192064 347 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm37399-201ENSMUST00000195224 416 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Mir219c-201ENSMUST00000199860 60 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm29781-201ENSMUST00000203862 478 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm10709-201ENSMUST00000213318 480 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 AC151843.1-201ENSMUST00000215960 691 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm6474-201ENSMUST00000223250 699 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm23378-201ENSMUST00000082942 107 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp39Q3TIX9 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm11260-201ENSMUST00000121163 942 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm12807-201ENSMUST00000121546 962 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm14903-201ENSMUST00000122435 537 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm22959-201ENSMUST00000122514 303 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm23212-201ENSMUST00000122718 60 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm9498-201ENSMUST00000140849 291 ntBASIC5.26□□□□□ -1.57
Usp39Q3TIX9 Gm25906-201ENSMUST00000158489 126 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 123.9 ms