Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Naip3-201ENSMUST00000118082 4208 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sf3b6P59708 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sf3b6P59708 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm24265-201ENSMUST00000101833 141 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm23979-201ENSMUST00000104071 128 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm22284-201ENSMUST00000104132 132 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm16431-201ENSMUST00000117454 431 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm14815-201ENSMUST00000120060 488 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm5384-201ENSMUST00000120313 463 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm6591-201ENSMUST00000121063 434 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm23867-201ENSMUST00000122649 274 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm24635-201ENSMUST00000122712 128 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm25909-201ENSMUST00000157619 121 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm24853-201ENSMUST00000158026 121 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm9294-201ENSMUST00000165198 789 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm17421-201ENSMUST00000167845 674 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm26177-201ENSMUST00000178683 107 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm5430-201ENSMUST00000182525 915 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm28146-201ENSMUST00000185517 701 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm28574-201ENSMUST00000185757 699 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm28397-201ENSMUST00000187970 699 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.35□□□□□ -1.55
Sf3b6P59708 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm29366-201ENSMUST00000190481 699 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm37189-201ENSMUST00000192131 298 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm18427-201ENSMUST00000195422 515 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm17954-201ENSMUST00000195893 607 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm42708-201ENSMUST00000196332 905 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.35□□□□□ -1.55
Sf3b6P59708 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm5551-201ENSMUST00000199720 690 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm45048-201ENSMUST00000207058 429 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm9535-201ENSMUST00000218499 768 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm18405-201ENSMUST00000220743 511 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Gm25512-201ENSMUST00000083863 107 ntBASIC5.35□□□□□ -1.55
Sf3b6P59708 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sf3b6P59708 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sf3b6P59708 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sf3b6P59708 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sf3b6P59708 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sf3b6P59708 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.34□□□□□ -1.55
Sf3b6P59708 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sf3b6P59708 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Sf3b6P59708 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.34□□□□□ -1.55
Sf3b6P59708 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sf3b6P59708 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.34□□□□□ -1.55
Sf3b6P59708 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sf3b6P59708 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.34□□□□□ -1.55
Sf3b6P59708 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sf3b6P59708 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sf3b6P59708 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sf3b6P59708 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm11219-201ENSMUST00000118565 358 ntBASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm6427-201ENSMUST00000118721 979 ntBASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm11843-201ENSMUST00000118984 425 ntBASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm12231-201ENSMUST00000119447 695 ntBASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm14294-201ENSMUST00000119749 751 ntBASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm8430-201ENSMUST00000119780 471 ntBASIC5.34□□□□□ -1.55
Sf3b6P59708 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.34□□□□□ -1.55
Sf3b6P59708 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.34□□□□□ -1.55
Sf3b6P59708 Mir5617-201ENSMUST00000176786 57 ntBASIC5.34□□□□□ -1.55
Sf3b6P59708 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Sf3b6P59708 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms