Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Mup-ps1-201ENSMUST00000120720 544 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Gm16471-201ENSMUST00000121940 618 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdh11P55288 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdh11P55288 Snora81-201ENSMUST00000157310 178 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Gm23819-201ENSMUST00000158744 109 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdh11P55288 Gm27636-201ENSMUST00000184528 122 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdh11P55288 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Cdh11P55288 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdh11P55288 Mrgpra14-201ENSMUST00000189782 913 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Gm18426-201ENSMUST00000191874 973 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Gm37070-201ENSMUST00000193272 460 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdh11P55288 Gm42459-201ENSMUST00000199679 742 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdh11P55288 Gm18127-201ENSMUST00000208479 725 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdh11P55288 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Gm19181-201ENSMUST00000218891 940 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
Cdh11P55288 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdh11P55288 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdh11P55288 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdh11P55288 Mir342-201ENSMUST00000083502 99 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdh11P55288 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdh11P55288 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdh11P55288 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.43□□□□□ -1.7
Cdh11P55288 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Cdh11P55288 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdh11P55288 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdh11P55288 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Cdh11P55288 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdh11P55288 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdh11P55288 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Cdh11P55288 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Cdh11P55288 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Cdh11P55288 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 Gm14046-201ENSMUST00000119389 509 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Gm3835-201ENSMUST00000120752 403 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Gm14122-201ENSMUST00000122076 973 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Gm16345-201ENSMUST00000146065 158 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.42□□□□□ -1.7
Cdh11P55288 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdh11P55288 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cdh11P55288 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 Gm21617-201ENSMUST00000188297 691 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdh11P55288 Gm28389-201ENSMUST00000190090 697 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Gm28466-201ENSMUST00000190678 659 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 Gm37098-201ENSMUST00000192290 244 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Gm44300-201ENSMUST00000196792 121 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Gm44088-201ENSMUST00000204595 237 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Gm45474-201ENSMUST00000209471 408 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.42□□□□□ -1.7
Cdh11P55288 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdh11P55288 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdh11P55288 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 CT025525.3-201ENSMUST00000228858 366 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cdh11P55288 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 Gm23626-201ENSMUST00000082458 133 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
Cdh11P55288 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdh11P55288 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.42□□□□□ -1.7
Cdh11P55288 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdh11P55288 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdh11P55288 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Cdh11P55288 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdh11P55288 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdh11P55288 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdh11P55288 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdh11P55288 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdh11P55288 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cdh11P55288 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdh11P55288 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cdh11P55288 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cdh11P55288 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.41□□□□□ -1.7
Cdh11P55288 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC4.41□□□□□ -1.7
Cdh11P55288 Gm15670-201ENSMUST00000117740 447 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms