Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Shmt1P50431 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm7739-201ENSMUST00000221131 1560 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Shmt1P50431 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shmt1P50431 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm3089-201ENSMUST00000200804 1395 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm3302-201ENSMUST00000201462 1395 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm23593-201ENSMUST00000104309 120 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm15854-201ENSMUST00000118879 808 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm15443-201ENSMUST00000118947 820 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm8430-201ENSMUST00000119780 471 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm12770-201ENSMUST00000121734 462 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.6□□□□□ -1.51
Shmt1P50431 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm25898-201ENSMUST00000158303 106 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm3339-201ENSMUST00000163462 475 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm26652-202ENSMUST00000181672 475 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm27543-201ENSMUST00000183562 177 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.6□□□□□ -1.51
Shmt1P50431 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm28414-201ENSMUST00000190111 294 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm19280-201ENSMUST00000190191 205 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm37979-201ENSMUST00000193065 712 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm2011-203ENSMUST00000203750 435 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm29817-201ENSMUST00000210098 172 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Gm8748-201ENSMUST00000211125 587 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC5.6□□□□□ -1.51
Shmt1P50431 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC5.6□□□□□ -1.51
Shmt1P50431 AC156560.1-201ENSMUST00000221425 256 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.6□□□□□ -1.51
Shmt1P50431 AC124729.1-202ENSMUST00000225587 938 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 AC117814.1-201ENSMUST00000226135 352 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm4822-201ENSMUST00000077551 479 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC5.6□□□□□ -1.51
Shmt1P50431 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Shmt1P50431 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Shmt1P50431 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Shmt1P50431 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.6□□□□□ -1.51
Shmt1P50431 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Shmt1P50431 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
Shmt1P50431 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
Shmt1P50431 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Shmt1P50431 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
Shmt1P50431 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.6□□□□□ -1.51
Shmt1P50431 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.59□□□□□ -1.51
Shmt1P50431 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Shmt1P50431 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.59□□□□□ -1.51
Shmt1P50431 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Shmt1P50431 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.59□□□□□ -1.51
Shmt1P50431 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Shmt1P50431 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.59□□□□□ -1.51
Shmt1P50431 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.59□□□□□ -1.51
Shmt1P50431 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.59□□□□□ -1.51
Shmt1P50431 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Shmt1P50431 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.59□□□□□ -1.51
Shmt1P50431 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Shmt1P50431 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Shmt1P50431 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Shmt1P50431 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Shmt1P50431 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Shmt1P50431 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Shmt1P50431 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.59□□□□□ -1.51
Shmt1P50431 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Shmt1P50431 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Shmt1P50431 Gm23942-201ENSMUST00000101956 107 ntBASIC5.59□□□□□ -1.51
Shmt1P50431 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Shmt1P50431 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Shmt1P50431 Gm12994-201ENSMUST00000119601 447 ntBASIC5.59□□□□□ -1.51
Shmt1P50431 Gm13339-201ENSMUST00000120651 510 ntBASIC5.59□□□□□ -1.51
Shmt1P50431 Gm12685-201ENSMUST00000121702 214 ntBASIC5.59□□□□□ -1.51
Shmt1P50431 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Shmt1P50431 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC5.59□□□□□ -1.51
Shmt1P50431 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.59□□□□□ -1.51
Shmt1P50431 Gm23537-201ENSMUST00000157536 330 ntBASIC5.59□□□□□ -1.51
Shmt1P50431 Gm23505-201ENSMUST00000158989 130 ntBASIC5.59□□□□□ -1.51
Shmt1P50431 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Shmt1P50431 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms