Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.14□□□□□ -1.75
Tnfsf4P43488 Gm44675-201ENSMUST00000208188 2927 ntBASIC4.14□□□□□ -1.75
Tnfsf4P43488 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Tnfsf4P43488 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Tnfsf4P43488 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Tnfsf4P43488 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.14□□□□□ -1.75
Tnfsf4P43488 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Tnfsf4P43488 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm22899-201ENSMUST00000104540 131 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm11432-201ENSMUST00000117334 231 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm12340-201ENSMUST00000121617 462 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm23069-201ENSMUST00000158240 311 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm15838-201ENSMUST00000161575 180 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm27896-201ENSMUST00000175162 317 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm9499-201ENSMUST00000180888 964 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm8599-201ENSMUST00000193033 457 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm17954-201ENSMUST00000195893 607 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Mir28a-201ENSMUST00000083560 86 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.13□□□□□ -1.75
Tnfsf4P43488 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Tnfsf4P43488 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm22473-201ENSMUST00000104114 132 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm23014-201ENSMUST00000104144 130 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm14756-201ENSMUST00000116395 240 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm15779-201ENSMUST00000117470 412 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm14067-201ENSMUST00000119340 314 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Clec2f-201ENSMUST00000121051 374 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm13220-201ENSMUST00000121535 508 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm8200-201ENSMUST00000122390 222 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm22312-201ENSMUST00000158005 130 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Mir5110-201ENSMUST00000175537 87 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm9687-201ENSMUST00000189312 602 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm18150-201ENSMUST00000195341 645 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm43724-201ENSMUST00000197516 226 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm7093-201ENSMUST00000223004 581 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Tnfsf4P43488 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Tnfsf4P43488 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.12□□□□□ -1.75
Tnfsf4P43488 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Tnfsf4P43488 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.11□□□□□ -1.75
Tnfsf4P43488 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Tnfsf4P43488 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Tnfsf4P43488 Gm26019-201ENSMUST00000104407 119 ntBASIC4.11□□□□□ -1.75
Tnfsf4P43488 Gm12073-201ENSMUST00000117382 524 ntBASIC4.11□□□□□ -1.75
Tnfsf4P43488 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Tnfsf4P43488 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.11□□□□□ -1.75
Tnfsf4P43488 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.11□□□□□ -1.75
Tnfsf4P43488 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.11□□□□□ -1.75
Tnfsf4P43488 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.11□□□□□ -1.75
Tnfsf4P43488 Gm24898-201ENSMUST00000158133 106 ntBASIC4.11□□□□□ -1.75
Tnfsf4P43488 Gm21999-201ENSMUST00000165985 387 ntBASIC4.11□□□□□ -1.75
Tnfsf4P43488 Gm19086-201ENSMUST00000190772 665 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms