Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sox6P40645 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.31□□□□□ -1.72
Sox6P40645 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.31□□□□□ -1.72
Sox6P40645 Gm43136-201ENSMUST00000200403 636 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm32308-201ENSMUST00000203053 280 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm4574-201ENSMUST00000207804 542 ntBASIC4.31□□□□□ -1.72
Sox6P40645 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.31□□□□□ -1.72
Sox6P40645 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.31□□□□□ -1.72
Sox6P40645 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm6776-201ENSMUST00000057752 900 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm6195-201ENSMUST00000063059 357 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sox6P40645 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Sox6P40645 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sox6P40645 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sox6P40645 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Sox6P40645 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sox6P40645 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sox6P40645 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sox6P40645 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sox6P40645 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sox6P40645 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Sox6P40645 Gm6893-201ENSMUST00000118385 522 ntBASIC4.3□□□□□ -1.72
Sox6P40645 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Sox6P40645 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.3□□□□□ -1.72
Sox6P40645 Gm20397-201ENSMUST00000174520 362 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Gm9457-201ENSMUST00000180176 372 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.3□□□□□ -1.72
Sox6P40645 Gm28263-201ENSMUST00000185884 400 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.3□□□□□ -1.72
Sox6P40645 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.3□□□□□ -1.72
Sox6P40645 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Gm44690-201ENSMUST00000207984 382 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.3□□□□□ -1.72
Sox6P40645 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.3□□□□□ -1.72
Sox6P40645 Gm45710-201ENSMUST00000212847 215 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sox6P40645 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.3□□□□□ -1.72
Sox6P40645 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Sox6P40645 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Sox6P40645 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Sox6P40645 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sox6P40645 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sox6P40645 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sox6P40645 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Sox6P40645 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.3□□□□□ -1.72
Sox6P40645 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Sox6P40645 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sox6P40645 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.3□□□□□ -1.72
Sox6P40645 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sox6P40645 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.29□□□□□ -1.72
Sox6P40645 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Sox6P40645 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Sox6P40645 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Sox6P40645 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Mir147-201ENSMUST00000102354 79 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm15785-201ENSMUST00000119145 694 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm15361-201ENSMUST00000119320 444 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm13149-201ENSMUST00000122071 339 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm15212-201ENSMUST00000122403 466 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm22819-201ENSMUST00000157445 303 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm23897-201ENSMUST00000158110 158 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm16114-201ENSMUST00000161930 300 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm5258-201ENSMUST00000165437 327 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Sox6P40645 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.29□□□□□ -1.72
Sox6P40645 Mir5103-201ENSMUST00000175111 79 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.29□□□□□ -1.72
Sox6P40645 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Sox6P40645 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Sox6P40645 Gm28196-201ENSMUST00000187719 640 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm28976-201ENSMUST00000188070 144 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm6546-201ENSMUST00000192096 766 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC4.29□□□□□ -1.72
Sox6P40645 Gm36986-201ENSMUST00000195320 353 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Sox6P40645 Gm17775-201ENSMUST00000198542 258 ntBASIC4.29□□□□□ -1.72
Sox6P40645 Gm4714-201ENSMUST00000203395 279 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms