Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Traf1P39428 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Traf1P39428 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Traf1P39428 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.57□□□□□ -1.52
Traf1P39428 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Traf1P39428 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Traf1P39428 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Traf1P39428 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Traf1P39428 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Traf1P39428 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Traf1P39428 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
Traf1P39428 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Traf1P39428 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Traf1P39428 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.56□□□□□ -1.52
Traf1P39428 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm11742-201ENSMUST00000119903 233 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm12237-201ENSMUST00000120158 470 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm13867-201ENSMUST00000120844 395 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm12466-201ENSMUST00000121199 620 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Traf1P39428 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.56□□□□□ -1.52
Traf1P39428 Gm25278-201ENSMUST00000157267 120 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm22519-201ENSMUST00000158270 178 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm24944-201ENSMUST00000158330 128 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm28097-201ENSMUST00000187333 366 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.56□□□□□ -1.52
Traf1P39428 Gm42720-201ENSMUST00000196813 300 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm42694-201ENSMUST00000196951 358 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm43295-201ENSMUST00000201439 412 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm43371-201ENSMUST00000202838 1031 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm45236-201ENSMUST00000208632 229 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Gm45651-201ENSMUST00000210857 335 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Traf1P39428 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.56□□□□□ -1.52
Traf1P39428 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Traf1P39428 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Traf1P39428 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Traf1P39428 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Traf1P39428 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.56□□□□□ -1.52
Traf1P39428 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Traf1P39428 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Traf1P39428 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Traf1P39428 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Traf1P39428 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Traf1P39428 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Traf1P39428 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.56□□□□□ -1.52
Traf1P39428 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Traf1P39428 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Traf1P39428 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Traf1P39428 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Traf1P39428 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Traf1P39428 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Traf1P39428 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Traf1P39428 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Traf1P39428 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Traf1P39428 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Traf1P39428 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Traf1P39428 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Traf1P39428 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Traf1P39428 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Traf1P39428 Gm23594-201ENSMUST00000104307 134 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Gm12849-201ENSMUST00000120013 739 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Gm15168-201ENSMUST00000121057 316 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Gm13132-201ENSMUST00000121194 472 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Gm13460-201ENSMUST00000121274 353 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.55□□□□□ -1.52
Traf1P39428 Gm16259-201ENSMUST00000145241 553 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Gm2182-201ENSMUST00000145243 663 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC5.55□□□□□ -1.52
Traf1P39428 Gm25037-201ENSMUST00000175418 110 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Mir7022-201ENSMUST00000183749 61 ntBASIC5.55□□□□□ -1.52
Traf1P39428 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Traf1P39428 Gm28116-201ENSMUST00000189064 387 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Gm43765-201ENSMUST00000196303 893 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Traf1P39428 Gm44849-201ENSMUST00000207595 484 ntBASIC5.55□□□□□ -1.52
Traf1P39428 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.55□□□□□ -1.52
Traf1P39428 CT030254.3-201ENSMUST00000225959 1231 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Gm25147-201ENSMUST00000083030 105 ntBASIC5.55□□□□□ -1.52
Traf1P39428 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Traf1P39428 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Traf1P39428 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Traf1P39428 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Traf1P39428 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Traf1P39428 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Traf1P39428 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Traf1P39428 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Traf1P39428 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Traf1P39428 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Traf1P39428 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Traf1P39428 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Traf1P39428 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.54□□□□□ -1.52
Traf1P39428 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Traf1P39428 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Traf1P39428 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms