Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
P20040 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
P20040 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
P20040 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
P20040 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
P20040 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
P20040 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
P20040 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
P20040 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
P20040 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.11□□□□□ -1.75
P20040 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.11□□□□□ -1.75
P20040 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.11□□□□□ -1.75
P20040 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.11□□□□□ -1.75
P20040 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.11□□□□□ -1.75
P20040 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.11□□□□□ -1.75
P20040 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
P20040 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
P20040 Gm24142-201ENSMUST00000101960 107 ntBASIC4.11□□□□□ -1.75
P20040 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
P20040 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
P20040 Gm13250-201ENSMUST00000117209 753 ntBASIC4.11□□□□□ -1.75
P20040 Gm12073-201ENSMUST00000117382 524 ntBASIC4.11□□□□□ -1.75
P20040 Gm14621-201ENSMUST00000117709 689 ntBASIC4.11□□□□□ -1.75
P20040 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.11□□□□□ -1.75
P20040 Gm11366-201ENSMUST00000119279 429 ntBASIC4.11□□□□□ -1.75
P20040 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.11□□□□□ -1.75
P20040 Gm11909-201ENSMUST00000121424 759 ntBASIC4.11□□□□□ -1.75
P20040 Gm26347-201ENSMUST00000157526 131 ntBASIC4.11□□□□□ -1.75
P20040 Gm22968-201ENSMUST00000157955 118 ntBASIC4.11□□□□□ -1.75
P20040 Gm24188-201ENSMUST00000157980 108 ntBASIC4.11□□□□□ -1.75
P20040 Gm23046-201ENSMUST00000158369 284 ntBASIC4.11□□□□□ -1.75
P20040 Gm23179-201ENSMUST00000158693 304 ntBASIC4.11□□□□□ -1.75
P20040 Gm5258-201ENSMUST00000165437 327 ntBASIC4.11□□□□□ -1.75
P20040 Mir6344-201ENSMUST00000183462 104 ntBASIC4.11□□□□□ -1.75
P20040 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
P20040 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
P20040 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.11□□□□□ -1.75
P20040 Gm17811-201ENSMUST00000206193 387 ntBASIC4.11□□□□□ -1.75
P20040 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.11□□□□□ -1.75
P20040 Gm45689-201ENSMUST00000210522 133 ntBASIC4.11□□□□□ -1.75
P20040 Gm19885-201ENSMUST00000212853 343 ntBASIC4.11□□□□□ -1.75
P20040 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC4.11□□□□□ -1.75
P20040 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.11□□□□□ -1.75
P20040 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
P20040 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
P20040 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
P20040 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
P20040 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
P20040 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
P20040 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.11□□□□□ -1.75
P20040 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
P20040 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
P20040 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
P20040 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
P20040 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
P20040 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.11□□□□□ -1.75
P20040 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
P20040 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
P20040 Gm18491-201ENSMUST00000192492 1594 ntBASIC4.1□□□□□ -1.75
P20040 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
P20040 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.1□□□□□ -1.75
P20040 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
P20040 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.1□□□□□ -1.75
P20040 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
P20040 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
P20040 Gm10552-201ENSMUST00000113396 372 ntBASIC4.1□□□□□ -1.75
P20040 Gm16128-201ENSMUST00000117855 626 ntBASIC4.1□□□□□ -1.75
P20040 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.1□□□□□ -1.75
P20040 Gm15745-201ENSMUST00000119807 115 ntBASIC4.1□□□□□ -1.75
P20040 Gm11325-201ENSMUST00000119967 469 ntBASIC4.1□□□□□ -1.75
P20040 Gm11385-201ENSMUST00000121513 570 ntBASIC4.1□□□□□ -1.75
P20040 Gm14126-201ENSMUST00000122345 395 ntBASIC4.1□□□□□ -1.75
P20040 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.1□□□□□ -1.75
P20040 Gm24217-201ENSMUST00000158260 133 ntBASIC4.1□□□□□ -1.75
P20040 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
P20040 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.1□□□□□ -1.75
P20040 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.1□□□□□ -1.75
P20040 Gm9499-201ENSMUST00000180888 964 ntBASIC4.1□□□□□ -1.75
P20040 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
P20040 Gm28118-201ENSMUST00000185957 294 ntBASIC4.1□□□□□ -1.75
P20040 Gm9687-201ENSMUST00000189312 602 ntBASIC4.1□□□□□ -1.75
P20040 Gm29036-201ENSMUST00000189967 877 ntBASIC4.1□□□□□ -1.75
P20040 Gm29552-201ENSMUST00000190548 660 ntBASIC4.1□□□□□ -1.75
P20040 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.1□□□□□ -1.75
P20040 Gm29332-201ENSMUST00000190829 227 ntBASIC4.1□□□□□ -1.75
P20040 Gm37243-201ENSMUST00000193407 595 ntBASIC4.1□□□□□ -1.75
P20040 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC4.1□□□□□ -1.75
P20040 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC4.1□□□□□ -1.75
P20040 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
P20040 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.1□□□□□ -1.75
P20040 Gm8891-201ENSMUST00000198546 832 ntBASIC4.1□□□□□ -1.75
P20040 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.1□□□□□ -1.75
P20040 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC4.1□□□□□ -1.75
P20040 Gm43136-201ENSMUST00000200403 636 ntBASIC4.1□□□□□ -1.75
P20040 Gm44402-201ENSMUST00000203677 238 ntBASIC4.1□□□□□ -1.75
P20040 Gm6230-201ENSMUST00000208077 780 ntBASIC4.1□□□□□ -1.75
P20040 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.1□□□□□ -1.75
P20040 Gm8106-201ENSMUST00000213123 523 ntBASIC4.1□□□□□ -1.75
P20040 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.1□□□□□ -1.75
P20040 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms