Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Hmgb3O54879 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm28769-201ENSMUST00000190176 615 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Vmn1r82-202ENSMUST00000191002 918 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm19231-201ENSMUST00000193212 830 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm43037-201ENSMUST00000196808 250 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm44054-201ENSMUST00000203814 372 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm44048-201ENSMUST00000204531 361 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm18258-201ENSMUST00000210413 542 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC3.59□□□□□ -1.83
Hmgb3O54879 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm3800-201ENSMUST00000221086 554 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 AL606513.1-201ENSMUST00000225369 579 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 AC154657.1-201ENSMUST00000226394 775 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hmgb3O54879 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm22741-201ENSMUST00000083438 165 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm44847-201ENSMUST00000207104 1991 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgb3O54879 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Hmgb3O54879 Gm43843-201ENSMUST00000202396 1587 ntBASIC3.59□□□□□ -1.84
Hmgb3O54879 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Hmgb3O54879 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Hmgb3O54879 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Hmgb3O54879 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Hmgb3O54879 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Hmgb3O54879 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmgb3O54879 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmgb3O54879 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmgb3O54879 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm24124-201ENSMUST00000104103 132 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm14772-201ENSMUST00000116562 514 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm11550-201ENSMUST00000118210 699 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm15603-201ENSMUST00000119252 492 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm13333-201ENSMUST00000119424 781 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm13488-201ENSMUST00000120419 179 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hmgb3O54879 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm24507-201ENSMUST00000157683 134 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm17043-201ENSMUST00000164621 1283 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Mir7012-201ENSMUST00000183900 64 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm21742-201ENSMUST00000189352 548 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC3.58□□□□□ -1.84
Hmgb3O54879 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm43028-201ENSMUST00000202561 481 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm19366-201ENSMUST00000206996 156 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm44681-201ENSMUST00000208447 842 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hmgb3O54879 AC110381.1-201ENSMUST00000218987 586 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC3.58□□□□□ -1.84
Hmgb3O54879 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmgb3O54879 AC154239.2-201ENSMUST00000227859 233 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 AC133910.1-201ENSMUST00000228128 624 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm37174-201ENSMUST00000194699 3058 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmgb3O54879 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmgb3O54879 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.58□□□□□ -1.84
Hmgb3O54879 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Hmgb3O54879 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm23910-201ENSMUST00000104597 132 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm5925-201ENSMUST00000105016 1497 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Hmgb3O54879 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm15058-201ENSMUST00000117689 458 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm14122-201ENSMUST00000122076 973 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC3.57□□□□□ -1.84
Hmgb3O54879 Gm23534-201ENSMUST00000157539 97 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.57□□□□□ -1.84
Hmgb3O54879 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC3.57□□□□□ -1.84
Hmgb3O54879 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Hmgb3O54879 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms