Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cx3cl1O35188 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm23193-201ENSMUST00000102427 82 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm11877-201ENSMUST00000118921 852 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm5391-201ENSMUST00000121155 613 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm14500-201ENSMUST00000121647 113 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm22243-201ENSMUST00000178754 120 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm21850-201ENSMUST00000179792 359 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Mir6410-201ENSMUST00000184204 104 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Mir6418-201ENSMUST00000185075 115 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm38150-201ENSMUST00000192996 452 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm2622-201ENSMUST00000200018 471 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm4714-201ENSMUST00000203395 279 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm44054-201ENSMUST00000203814 372 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm44038-201ENSMUST00000203952 889 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm44523-201ENSMUST00000205616 417 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm23623-201ENSMUST00000082461 107 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm25821-201ENSMUST00000093657 133 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cx3cl1O35188 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.24□□□□□ -1.73
Cx3cl1O35188 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cx3cl1O35188 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm22473-201ENSMUST00000104114 132 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm15333-201ENSMUST00000118825 364 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm13808-201ENSMUST00000121353 184 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm12005-201ENSMUST00000121451 379 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm13232-201ENSMUST00000121816 632 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm12317-201ENSMUST00000122307 319 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm25278-201ENSMUST00000157267 120 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Zakit-201ENSMUST00000157677 308 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm26085-201ENSMUST00000157900 116 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm26983-201ENSMUST00000182051 388 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm27160-201ENSMUST00000184837 199 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm5066-201ENSMUST00000188479 822 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm18181-201ENSMUST00000190670 736 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm37881-201ENSMUST00000193001 421 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm42999-201ENSMUST00000198049 786 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm43276-201ENSMUST00000199712 364 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cx3cl1O35188 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm22350-201ENSMUST00000083924 156 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cx3cl1O35188 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.23□□□□□ -1.73
Cx3cl1O35188 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cx3cl1O35188 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cx3cl1O35188 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.22□□□□□ -1.73
Cx3cl1O35188 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.22□□□□□ -1.73
Cx3cl1O35188 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cx3cl1O35188 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Cx3cl1O35188 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Cx3cl1O35188 Gm15752-201ENSMUST00000117427 394 ntBASIC4.22□□□□□ -1.73
Cx3cl1O35188 Gm13755-201ENSMUST00000118509 305 ntBASIC4.22□□□□□ -1.73
Cx3cl1O35188 Gm15480-201ENSMUST00000120442 519 ntBASIC4.22□□□□□ -1.73
Cx3cl1O35188 Gm12466-201ENSMUST00000121199 620 ntBASIC4.22□□□□□ -1.73
Cx3cl1O35188 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.22□□□□□ -1.73
Cx3cl1O35188 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms