Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NpcdF8VQB8 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.89□□□□□ -1.31
NpcdF8VQB8 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
NpcdF8VQB8 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.89□□□□□ -1.31
NpcdF8VQB8 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
NpcdF8VQB8 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NpcdF8VQB8 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.89□□□□□ -1.31
NpcdF8VQB8 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
NpcdF8VQB8 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.89□□□□□ -1.31
NpcdF8VQB8 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NpcdF8VQB8 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NpcdF8VQB8 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NpcdF8VQB8 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.89□□□□□ -1.31
NpcdF8VQB8 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NpcdF8VQB8 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm43665-201ENSMUST00000198672 1659 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm43121-201ENSMUST00000199065 1305 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Igkv13-87-201ENSMUST00000114214 286 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm25315-201ENSMUST00000116823 121 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm8430-201ENSMUST00000119780 471 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm12368-201ENSMUST00000122251 434 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm23792-201ENSMUST00000122557 93 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm16274-201ENSMUST00000139251 592 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm23352-201ENSMUST00000158428 64 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Ear-ps7-201ENSMUST00000161287 442 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm37341-201ENSMUST00000194680 371 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm20940-201ENSMUST00000197308 360 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Mir142-201ENSMUST00000198092 64 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm19457-201ENSMUST00000200995 448 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm43580-201ENSMUST00000202892 284 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm7333-201ENSMUST00000213449 1060 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Supt4b-201ENSMUST00000214434 351 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm24623-201ENSMUST00000082616 194 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Mir449a-201ENSMUST00000083641 91 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm45577-201ENSMUST00000210206 2287 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NpcdF8VQB8 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.88□□□□□ -1.31
NpcdF8VQB8 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
NpcdF8VQB8 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
NpcdF8VQB8 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm10936-201ENSMUST00000105264 252 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm11970-201ENSMUST00000116105 320 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm16128-201ENSMUST00000117855 626 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm13593-201ENSMUST00000121329 692 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm12819-201ENSMUST00000122223 629 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 Defa-ps12-201ENSMUST00000122353 193 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm23883-201ENSMUST00000122686 290 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm24628-201ENSMUST00000122761 289 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm6081-201ENSMUST00000134472 489 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm23327-201ENSMUST00000157420 78 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.87□□□□□ -1.31
NpcdF8VQB8 Gm8224-201ENSMUST00000166178 497 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms