Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scn1aA2APX8 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Scn1aA2APX8 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Scn1aA2APX8 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.54□□□□□ -1.68
Scn1aA2APX8 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Scn1aA2APX8 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scn1aA2APX8 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Scn1aA2APX8 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Scn1aA2APX8 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm12884-201ENSMUST00000120371 325 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm22986-201ENSMUST00000122753 130 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Scn1aA2APX8 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Trbv11-201ENSMUST00000194354 260 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm44487-201ENSMUST00000205145 325 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm2059-201ENSMUST00000212025 287 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Scn1aA2APX8 AC192333.5-201ENSMUST00000224620 2350 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.53□□□□□ -1.68
Scn1aA2APX8 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm9314-201ENSMUST00000199881 1528 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Snord66-201ENSMUST00000104051 75 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm10059-201ENSMUST00000131139 171 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm5963-201ENSMUST00000143451 236 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Mir7074-201ENSMUST00000183884 63 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm27414-201ENSMUST00000185033 381 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.53□□□□□ -1.68
Scn1aA2APX8 AC162183.1-202ENSMUST00000225434 904 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Mir202-201ENSMUST00000083568 72 ntBASIC4.53□□□□□ -1.68
Scn1aA2APX8 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scn1aA2APX8 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.52□□□□□ -1.69
Scn1aA2APX8 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Gm6558-201ENSMUST00000191934 1973 ntBASIC4.52□□□□□ -1.69
Scn1aA2APX8 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Gm23226-201ENSMUST00000116927 103 ntBASIC4.52□□□□□ -1.69
Scn1aA2APX8 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.52□□□□□ -1.69
Scn1aA2APX8 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.52□□□□□ -1.69
Scn1aA2APX8 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Gm29228-201ENSMUST00000185489 418 ntBASIC4.52□□□□□ -1.69
Scn1aA2APX8 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Gm43604-201ENSMUST00000199799 705 ntBASIC4.52□□□□□ -1.69
Scn1aA2APX8 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.52□□□□□ -1.69
Scn1aA2APX8 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Gm44543-201ENSMUST00000209136 396 ntBASIC4.52□□□□□ -1.69
Scn1aA2APX8 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.52□□□□□ -1.69
Scn1aA2APX8 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.52□□□□□ -1.69
Scn1aA2APX8 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Scn1aA2APX8 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.51□□□□□ -1.69
Scn1aA2APX8 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.51□□□□□ -1.69
Scn1aA2APX8 Gm15075-201ENSMUST00000122187 477 ntBASIC4.51□□□□□ -1.69
Scn1aA2APX8 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.51□□□□□ -1.69
Scn1aA2APX8 Gm25427-201ENSMUST00000157605 103 ntBASIC4.51□□□□□ -1.69
Scn1aA2APX8 Gm21070-201ENSMUST00000182425 985 ntBASIC4.51□□□□□ -1.69
Scn1aA2APX8 Mir6414-201ENSMUST00000183685 82 ntBASIC4.51□□□□□ -1.69
Scn1aA2APX8 Mir6933-201ENSMUST00000184982 81 ntBASIC4.51□□□□□ -1.69
Scn1aA2APX8 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1aA2APX8 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1aA2APX8 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.51□□□□□ -1.69
Scn1aA2APX8 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.51□□□□□ -1.69
Scn1aA2APX8 Gm44032-201ENSMUST00000204841 166 ntBASIC4.51□□□□□ -1.69
Scn1aA2APX8 Gm46998-201ENSMUST00000221444 330 ntBASIC4.51□□□□□ -1.69
Scn1aA2APX8 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Scn1aA2APX8 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.51□□□□□ -1.69
Scn1aA2APX8 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.51□□□□□ -1.69
Scn1aA2APX8 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
Scn1aA2APX8 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Scn1aA2APX8 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Scn1aA2APX8 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Scn1aA2APX8 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms