Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm29320-201ENSMUST00000185235 615 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm28471-201ENSMUST00000185994 615 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm29179-202ENSMUST00000186138 615 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm28598-201ENSMUST00000186490 615 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm29448-201ENSMUST00000186675 615 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm29314-201ENSMUST00000186800 615 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm28253-202ENSMUST00000187971 615 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm29268-201ENSMUST00000188669 615 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm29169-201ENSMUST00000189835 615 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm29218-205ENSMUST00000190846 615 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm28978-201ENSMUST00000191120 615 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm37172-201ENSMUST00000191926 615 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm43724-201ENSMUST00000197516 226 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm42459-201ENSMUST00000199679 742 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm18007-201ENSMUST00000205019 844 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm39197-201ENSMUST00000212069 457 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm19256-201ENSMUST00000218550 231 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 AC155266.1-201ENSMUST00000220762 904 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
CtcflA2APF3 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CtcflA2APF3 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Olfr881-201ENSMUST00000074611 948 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CtcflA2APF3 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm25187-201ENSMUST00000083906 133 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CtcflA2APF3 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm11912-201ENSMUST00000117235 264 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm15766-201ENSMUST00000118025 813 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm16259-201ENSMUST00000145241 553 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm4487-201ENSMUST00000150617 442 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm25865-201ENSMUST00000158247 104 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm23179-201ENSMUST00000158693 304 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm8358-201ENSMUST00000167222 555 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm26318-201ENSMUST00000176507 96 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CtcflA2APF3 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.2□□□□□ -1.74
CtcflA2APF3 Mir6971-201ENSMUST00000183497 63 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm38080-201ENSMUST00000194035 268 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.2□□□□□ -1.74
CtcflA2APF3 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Mir7682-201ENSMUST00000198467 58 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm2011-203ENSMUST00000203750 435 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CtcflA2APF3 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.2□□□□□ -1.74
CtcflA2APF3 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.2□□□□□ -1.74
CtcflA2APF3 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CtcflA2APF3 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CtcflA2APF3 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CtcflA2APF3 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CtcflA2APF3 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CtcflA2APF3 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.2□□□□□ -1.74
CtcflA2APF3 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.2□□□□□ -1.74
CtcflA2APF3 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CtcflA2APF3 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CtcflA2APF3 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CtcflA2APF3 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.19□□□□□ -1.74
CtcflA2APF3 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.19□□□□□ -1.74
CtcflA2APF3 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CtcflA2APF3 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CtcflA2APF3 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.19□□□□□ -1.74
CtcflA2APF3 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.19□□□□□ -1.74
CtcflA2APF3 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CtcflA2APF3 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CtcflA2APF3 Gm23692-201ENSMUST00000101881 160 ntBASIC4.19□□□□□ -1.74
CtcflA2APF3 Mir92b-201ENSMUST00000102300 83 ntBASIC4.19□□□□□ -1.74
CtcflA2APF3 Gm22468-201ENSMUST00000116680 120 ntBASIC4.19□□□□□ -1.74
CtcflA2APF3 Gm26248-201ENSMUST00000116700 121 ntBASIC4.19□□□□□ -1.74
CtcflA2APF3 Gm26137-201ENSMUST00000116701 121 ntBASIC4.19□□□□□ -1.74
CtcflA2APF3 Gm26190-201ENSMUST00000116704 121 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms