Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Gm6545-201ENSMUST00000217186 1786 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm17791-201ENSMUST00000185660 1501 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm25537-201ENSMUST00000103851 109 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm12423-201ENSMUST00000118334 135 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm12808-201ENSMUST00000120597 404 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm3835-201ENSMUST00000120752 403 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm13676-201ENSMUST00000122185 591 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm17152-201ENSMUST00000172430 535 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Mir1264-201ENSMUST00000175381 86 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Olfr1055-202ENSMUST00000188023 939 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm28468-201ENSMUST00000188536 615 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm29376-201ENSMUST00000189357 835 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm5045-201ENSMUST00000027054 810 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm6863-201ENSMUST00000052882 636 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.88□□□□□ -1.63
Rnf4Q9QZS2 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm15357-201ENSMUST00000119160 285 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm12978-201ENSMUST00000121250 522 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm5139-201ENSMUST00000175943 249 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Mir7687-201ENSMUST00000184722 59 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm29596-201ENSMUST00000185710 385 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm38670-201ENSMUST00000199248 77 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm42926-201ENSMUST00000200496 697 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm18705-201ENSMUST00000215985 913 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm5649-201ENSMUST00000217918 951 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Olfr151-202ENSMUST00000221099 929 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 AC159242.1-201ENSMUST00000225832 194 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 AC133654.1-201ENSMUST00000228411 672 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm7680-201ENSMUST00000216198 1348 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rnf4Q9QZS2 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.86□□□□□ -1.63
Rnf4Q9QZS2 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Rnf4Q9QZS2 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Rnf4Q9QZS2 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.86□□□□□ -1.63
Rnf4Q9QZS2 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.86□□□□□ -1.63
Rnf4Q9QZS2 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.86□□□□□ -1.63
Rnf4Q9QZS2 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.86□□□□□ -1.63
Rnf4Q9QZS2 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Rnf4Q9QZS2 Gm24340-201ENSMUST00000104208 97 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms