Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm29356-201ENSMUST00000186935 373 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm37601-201ENSMUST00000194922 394 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm43825-201ENSMUST00000199650 734 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm43895-201ENSMUST00000203219 855 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm44237-201ENSMUST00000205183 936 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 AC126554.4-201ENSMUST00000221055 409 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm23626-201ENSMUST00000082458 133 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Mir342-201ENSMUST00000083502 99 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.4□□□□□ -1.7
Lima1Q9ERG0 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Lima1Q9ERG0 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Lima1Q9ERG0 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.4□□□□□ -1.7
Lima1Q9ERG0 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Lima1Q9ERG0 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.4□□□□□ -1.7
Lima1Q9ERG0 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Lima1Q9ERG0 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Lima1Q9ERG0 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Lima1Q9ERG0 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Lima1Q9ERG0 Gm14512-201ENSMUST00000117924 230 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm14714-201ENSMUST00000119743 439 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm7840-201ENSMUST00000122086 533 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm24774-201ENSMUST00000157384 134 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm24217-201ENSMUST00000158260 133 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm27254-201ENSMUST00000183926 517 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm29332-201ENSMUST00000190829 227 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm37837-201ENSMUST00000191743 604 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm43974-201ENSMUST00000205080 684 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm19366-201ENSMUST00000206996 156 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm44543-201ENSMUST00000209136 396 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Mir30b-201ENSMUST00000083542 96 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm24031-201ENSMUST00000083930 131 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Lima1Q9ERG0 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm24160-201ENSMUST00000104594 126 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm10059-201ENSMUST00000131139 171 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm20428-201ENSMUST00000174365 283 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm5558-201ENSMUST00000178933 495 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm27355-201ENSMUST00000185045 128 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm29556-201ENSMUST00000187591 696 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm42830-201ENSMUST00000196642 313 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm42539-201ENSMUST00000197009 308 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms