Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm12186-201ENSMUST00000119050 945 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm13745-201ENSMUST00000121994 527 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm22958-201ENSMUST00000122512 184 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm25106-201ENSMUST00000122672 134 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm24444-201ENSMUST00000157244 308 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm24507-201ENSMUST00000157683 134 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm7281-201ENSMUST00000160010 543 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Mir6374-201ENSMUST00000184003 107 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm8599-201ENSMUST00000193033 457 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm44485-201ENSMUST00000199569 137 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm45032-201ENSMUST00000205375 520 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm44817-201ENSMUST00000205416 453 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm44757-201ENSMUST00000206373 157 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Nsa2-203ENSMUST00000225410 974 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Cdc40Q9DC48 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Cdc40Q9DC48 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
Cdc40Q9DC48 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Cdc40Q9DC48 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Cdc40Q9DC48 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm23014-201ENSMUST00000104144 130 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm22657-201ENSMUST00000104197 132 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm23608-201ENSMUST00000104545 128 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm14385-201ENSMUST00000116315 876 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm22277-201ENSMUST00000157204 277 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm24113-201ENSMUST00000157477 276 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm16571-201ENSMUST00000159112 291 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm16107-201ENSMUST00000162523 862 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.33□□□□□ -1.72
Cdc40Q9DC48 Mir5121-201ENSMUST00000198528 74 ntBASIC4.33□□□□□ -1.72
Cdc40Q9DC48 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms