Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm8458-201ENSMUST00000196658 819 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm43304-201ENSMUST00000196803 326 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm19096-201ENSMUST00000209705 766 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm7128-201ENSMUST00000211639 533 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm6171-201ENSMUST00000220760 645 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm6893-201ENSMUST00000118385 522 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm11631-201ENSMUST00000119220 156 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm15828-201ENSMUST00000119911 522 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm15168-201ENSMUST00000121057 316 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm25966-201ENSMUST00000157169 117 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm23673-201ENSMUST00000157474 298 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm6673-201ENSMUST00000166114 700 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm29281-201ENSMUST00000188077 381 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm28116-201ENSMUST00000189064 387 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm28389-201ENSMUST00000190090 697 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm7588-201ENSMUST00000216866 571 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Gm7822-201ENSMUST00000222433 581 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Smc1aQ9CU62 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm14995-201ENSMUST00000117135 391 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm12520-201ENSMUST00000117493 316 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm25106-201ENSMUST00000122672 134 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm37884-201ENSMUST00000191857 818 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm36997-201ENSMUST00000195090 707 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm43015-201ENSMUST00000199087 565 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm43276-201ENSMUST00000199712 364 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm44757-201ENSMUST00000206373 157 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 AC123534.1-201ENSMUST00000224060 656 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm22971-201ENSMUST00000083305 97 ntBASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.29□□□□□ -1.56
Smc1aQ9CU62 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm23193-201ENSMUST00000102427 82 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm8202-201ENSMUST00000117682 310 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm12760-201ENSMUST00000117861 482 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm4910-201ENSMUST00000119605 366 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm15390-201ENSMUST00000120323 738 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm13118-201ENSMUST00000120402 549 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms