Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm24376-201ENSMUST00000104399 127 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm26019-201ENSMUST00000104407 119 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm15916-201ENSMUST00000118355 736 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm11484-201ENSMUST00000119808 338 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm12103-201ENSMUST00000121892 362 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm23667-201ENSMUST00000157466 120 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Mir1251-201ENSMUST00000175486 84 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm27899-201ENSMUST00000184715 64 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm25481-201ENSMUST00000083221 158 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm22514-201ENSMUST00000122547 308 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm26347-201ENSMUST00000157526 131 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm18429-201ENSMUST00000198707 421 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm42983-201ENSMUST00000199879 815 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm44099-201ENSMUST00000203299 112 ntBASIC5.23□□□□□ -1.57
StrcQ8VIM6 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
StrcQ8VIM6 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
StrcQ8VIM6 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
StrcQ8VIM6 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
StrcQ8VIM6 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
StrcQ8VIM6 Gm24048-201ENSMUST00000102411 106 ntBASIC5.22□□□□□ -1.57
StrcQ8VIM6 Gm12062-201ENSMUST00000117533 259 ntBASIC5.22□□□□□ -1.57
StrcQ8VIM6 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC5.22□□□□□ -1.57
StrcQ8VIM6 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC5.22□□□□□ -1.57
StrcQ8VIM6 Gm12885-201ENSMUST00000122246 328 ntBASIC5.22□□□□□ -1.57
StrcQ8VIM6 Gm27158-201ENSMUST00000183813 238 ntBASIC5.22□□□□□ -1.57
StrcQ8VIM6 Gm27249-201ENSMUST00000185049 328 ntBASIC5.22□□□□□ -1.57
StrcQ8VIM6 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC5.22□□□□□ -1.57
StrcQ8VIM6 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.22□□□□□ -1.57
StrcQ8VIM6 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
StrcQ8VIM6 Gm18255-201ENSMUST00000211316 765 ntBASIC5.22□□□□□ -1.57
StrcQ8VIM6 Gm18120-201ENSMUST00000220079 511 ntBASIC5.22□□□□□ -1.57
StrcQ8VIM6 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
StrcQ8VIM6 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
StrcQ8VIM6 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
StrcQ8VIM6 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.57
StrcQ8VIM6 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
StrcQ8VIM6 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
StrcQ8VIM6 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.21□□□□□ -1.57
StrcQ8VIM6 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
StrcQ8VIM6 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
StrcQ8VIM6 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
StrcQ8VIM6 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
StrcQ8VIM6 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.21□□□□□ -1.57
StrcQ8VIM6 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.21□□□□□ -1.58
StrcQ8VIM6 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Gm25833-201ENSMUST00000104137 133 ntBASIC5.21□□□□□ -1.58
StrcQ8VIM6 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Gm12900-201ENSMUST00000120919 573 ntBASIC5.21□□□□□ -1.58
StrcQ8VIM6 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Gm22897-202ENSMUST00000197782 127 ntBASIC5.21□□□□□ -1.58
StrcQ8VIM6 Gm7468-201ENSMUST00000203900 652 ntBASIC5.21□□□□□ -1.58
StrcQ8VIM6 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.21□□□□□ -1.58
StrcQ8VIM6 AC123534.1-201ENSMUST00000224060 656 ntBASIC5.21□□□□□ -1.58
StrcQ8VIM6 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
StrcQ8VIM6 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
StrcQ8VIM6 Gm17109-201ENSMUST00000163985 358 ntBASIC5.2□□□□□ -1.58
StrcQ8VIM6 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
StrcQ8VIM6 Gm21045-201ENSMUST00000183058 1020 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms