Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm25876-201ENSMUST00000104329 119 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm12244-201ENSMUST00000119500 291 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm14837-201ENSMUST00000119688 206 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm7079-201ENSMUST00000119726 171 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm14534-201ENSMUST00000120045 357 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm13162-201ENSMUST00000121481 454 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm22755-201ENSMUST00000157143 100 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm23591-201ENSMUST00000157663 286 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm23501-201ENSMUST00000157744 256 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm18953-201ENSMUST00000175694 300 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm6113-201ENSMUST00000180319 639 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm27036-201ENSMUST00000182465 980 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm37235-201ENSMUST00000195171 59 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm8458-201ENSMUST00000196658 819 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm19457-201ENSMUST00000200995 448 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm45409-201ENSMUST00000211486 252 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm46312-201ENSMUST00000220961 420 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 AC158392.2-201ENSMUST00000225402 969 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm17165-201ENSMUST00000096155 493 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.26□□□□□ -1.57
Clrn1Q8K445 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Clrn1Q8K445 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Clrn1Q8K445 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm42606-201ENSMUST00000114209 239 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm4989-201ENSMUST00000118711 749 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm14411-201ENSMUST00000121798 914 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm22199-201ENSMUST00000122660 126 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm23883-201ENSMUST00000122686 290 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm25291-201ENSMUST00000122795 144 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm16274-201ENSMUST00000139251 592 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm22214-201ENSMUST00000157563 172 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm23224-201ENSMUST00000158122 271 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm22841-201ENSMUST00000158443 62 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clrn1Q8K445 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Clrn1Q8K445 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm26970-201ENSMUST00000182990 964 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm18900-201ENSMUST00000193218 584 ntBASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.25□□□□□ -1.57
Clrn1Q8K445 Gm44571-201ENSMUST00000208092 533 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms