Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm45129-201ENSMUST00000208444 2224 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm43696-201ENSMUST00000199385 6071 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm8858-201ENSMUST00000118259 342 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm13738-201ENSMUST00000122437 469 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm23034-201ENSMUST00000158001 147 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm24944-201ENSMUST00000158330 128 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm23059-201ENSMUST00000158978 107 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm26318-201ENSMUST00000176507 96 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm8669-201ENSMUST00000183839 945 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm28859-201ENSMUST00000186650 616 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm17981-201ENSMUST00000191109 739 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm44952-201ENSMUST00000204443 433 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm8106-201ENSMUST00000213123 523 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 AC115047.1-201ENSMUST00000213795 322 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm3333-202ENSMUST00000221763 1044 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm46436-201ENSMUST00000221851 1294 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm5215-201ENSMUST00000054380 405 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Gm7754-201ENSMUST00000223075 2064 ntBASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Brf1Q8CFK2 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC6.02□□□□□ -1.44
Brf1Q8CFK2 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.02□□□□□ -1.44
Brf1Q8CFK2 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 AC112274.1-201ENSMUST00000218957 4274 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Igkv11-106-201ENSMUST00000103331 346 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm15110-201ENSMUST00000117545 881 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm13484-201ENSMUST00000120738 412 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm11358-201ENSMUST00000122310 373 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm24371-201ENSMUST00000122662 267 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm16373-201ENSMUST00000129517 303 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm26490-201ENSMUST00000157879 140 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm2930-201ENSMUST00000170403 474 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm18953-201ENSMUST00000175694 300 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm25598-201ENSMUST00000179031 107 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm18340-201ENSMUST00000196342 609 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm43712-201ENSMUST00000198020 291 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 CT010505.1-201ENSMUST00000227026 396 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm23456-201ENSMUST00000083335 137 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Mir465-201ENSMUST00000093563 74 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm44288-201ENSMUST00000205061 2795 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Brf1Q8CFK2 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Brf1Q8CFK2 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms