Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Gm29036-201ENSMUST00000189967 877 ntBASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Gm43919-201ENSMUST00000204303 364 ntBASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Gm44765-201ENSMUST00000206927 601 ntBASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Mir99a-201ENSMUST00000083596 65 ntBASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ccdc28aQ8CEI3 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm25824-201ENSMUST00000157092 121 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm24898-201ENSMUST00000158133 106 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm25660-201ENSMUST00000158470 104 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm29031-201ENSMUST00000185316 614 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm29000-201ENSMUST00000185444 614 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm28204-201ENSMUST00000185934 614 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm28290-201ENSMUST00000186505 614 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm28161-201ENSMUST00000186669 614 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm28749-209ENSMUST00000189599 614 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm33163-201ENSMUST00000194504 614 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm43491-201ENSMUST00000197133 784 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm43730-201ENSMUST00000199863 372 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm44002-201ENSMUST00000205134 594 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm46190-201ENSMUST00000219650 427 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm22220-201ENSMUST00000082671 149 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Ccdc28aQ8CEI3 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm4596-201ENSMUST00000117197 442 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm22870-201ENSMUST00000157501 112 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm24188-201ENSMUST00000157980 108 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm9499-201ENSMUST00000180888 964 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm6366-201ENSMUST00000198766 826 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Mir28a-201ENSMUST00000083560 86 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Mir337-201ENSMUST00000083592 97 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Synpr-207ENSMUST00000223583 3362 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc28aQ8CEI3 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ccdc28aQ8CEI3 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.54□□□□□ -1.68
Ccdc28aQ8CEI3 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms