Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm21617-201ENSMUST00000188297 691 ntBASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Gm20954-201ENSMUST00000189078 644 ntBASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Gm38334-201ENSMUST00000195060 313 ntBASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Gm44779-201ENSMUST00000206937 708 ntBASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Gm4928-201ENSMUST00000219622 850 ntBASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nup88Q8CEC0 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm9443-201ENSMUST00000188406 816 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm36998-201ENSMUST00000193205 704 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm5284-201ENSMUST00000199053 903 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm43295-201ENSMUST00000201439 412 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm43371-201ENSMUST00000202838 1031 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm44523-201ENSMUST00000205616 417 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm46327-201ENSMUST00000218240 365 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm24917-201ENSMUST00000083935 104 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm25821-201ENSMUST00000093657 133 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Nup88Q8CEC0 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Gm12112-201ENSMUST00000117772 231 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Gm11510-201ENSMUST00000120278 347 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Mir3058-201ENSMUST00000175126 91 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Gm28011-201ENSMUST00000184097 175 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Gm29668-201ENSMUST00000187802 315 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Gm45236-201ENSMUST00000208632 229 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Gm21112-201ENSMUST00000212224 578 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Gm7760-201ENSMUST00000212265 578 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Gm7807-201ENSMUST00000212475 578 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Nup88Q8CEC0 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Nup88Q8CEC0 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Nup88Q8CEC0 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Nup88Q8CEC0 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms