Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm13321-201ENSMUST00000117101 400 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm7834-201ENSMUST00000117560 437 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm13386-201ENSMUST00000117677 124 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm15553-201ENSMUST00000118757 430 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm5754-201ENSMUST00000118774 892 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm12852-201ENSMUST00000119478 719 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm4910-201ENSMUST00000119605 366 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm13024-201ENSMUST00000121756 718 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm23465-201ENSMUST00000157134 262 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm23121-201ENSMUST00000157653 173 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Mir6410-201ENSMUST00000184204 104 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm28660-201ENSMUST00000186496 253 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm4734-201ENSMUST00000200117 777 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm44757-201ENSMUST00000206373 157 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm44554-201ENSMUST00000208738 147 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm18193-201ENSMUST00000210017 772 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm46190-201ENSMUST00000219650 427 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 AC126554.4-201ENSMUST00000221055 409 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm15333-201ENSMUST00000118825 364 ntBASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm11910-201ENSMUST00000121624 432 ntBASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Mir6374-201ENSMUST00000184003 107 ntBASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm18877-201ENSMUST00000207706 539 ntBASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 AC134860.3-201ENSMUST00000223564 1300 ntBASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Atg4aQ8C9S8 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Gm26355-201ENSMUST00000158220 105 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Gm16571-201ENSMUST00000159112 291 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Gm18128-201ENSMUST00000172625 511 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Mir3058-201ENSMUST00000175126 91 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Gm27896-201ENSMUST00000175162 317 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Gm24111-201ENSMUST00000175491 97 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Gm17953-201ENSMUST00000192061 667 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Gm43304-201ENSMUST00000196803 326 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Gm6366-201ENSMUST00000198766 826 ntBASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Atg4aQ8C9S8 Gm20074-201ENSMUST00000208144 484 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms