Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm13009-201ENSMUST00000121307 267 ntBASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Mir3110-201ENSMUST00000175053 80 ntBASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm26318-201ENSMUST00000176507 96 ntBASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm28614-201ENSMUST00000186483 458 ntBASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm21742-201ENSMUST00000189352 548 ntBASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm10292-202ENSMUST00000193165 585 ntBASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm37243-201ENSMUST00000193407 595 ntBASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm19269-201ENSMUST00000211401 804 ntBASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Gm19181-201ENSMUST00000218891 940 ntBASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Mir337-201ENSMUST00000083592 97 ntBASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ccdc40Q8BI79 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm11196-201ENSMUST00000119052 395 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm16259-201ENSMUST00000145241 553 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Mir5110-201ENSMUST00000175537 87 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm8614-201ENSMUST00000182528 978 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm27849-201ENSMUST00000183673 125 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm28389-201ENSMUST00000190090 697 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm18007-201ENSMUST00000205019 844 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 AC132260.2-201ENSMUST00000224482 344 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm5215-201ENSMUST00000054380 405 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm24319-201ENSMUST00000083389 107 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Mir188-201ENSMUST00000083464 68 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm43369-201ENSMUST00000196373 1552 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ccdc40Q8BI79 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm14995-201ENSMUST00000117135 391 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm14082-201ENSMUST00000118582 801 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm12041-201ENSMUST00000121606 602 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm25824-201ENSMUST00000157092 121 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm23534-201ENSMUST00000157539 97 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm22383-201ENSMUST00000158188 327 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm28625-201ENSMUST00000188309 205 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm43144-201ENSMUST00000198256 485 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm43116-201ENSMUST00000199789 195 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm32536-201ENSMUST00000205209 445 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4.97□□□□□ -1.61
Ccdc40Q8BI79 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms