Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm12131-201ENSMUST00000117479 359 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm12685-201ENSMUST00000121702 214 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm5699-201ENSMUST00000152491 723 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm25383-201ENSMUST00000157810 144 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm23965-201ENSMUST00000157969 142 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm2617-201ENSMUST00000185690 1066 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm44282-201ENSMUST00000203199 190 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 AC115047.1-201ENSMUST00000213795 322 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm4052-201ENSMUST00000220890 451 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 AC183092.2-201ENSMUST00000225542 1153 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm24035-201ENSMUST00000082867 107 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm28359-201ENSMUST00000187470 1322 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm20679-201ENSMUST00000177285 1402 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.11□□□□□ -1.59
Ubfd1Q78JW9 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm25418-201ENSMUST00000104214 129 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm24235-201ENSMUST00000104319 129 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm7657-201ENSMUST00000118851 666 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm15791-201ENSMUST00000120365 319 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm14732-201ENSMUST00000121372 545 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm12110-201ENSMUST00000121601 579 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm14162-201ENSMUST00000121985 601 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm2892-201ENSMUST00000145537 711 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm16345-201ENSMUST00000146065 158 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm26350-201ENSMUST00000157531 288 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm22355-201ENSMUST00000175531 96 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm28190-201ENSMUST00000189766 722 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm2053-201ENSMUST00000195671 631 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm22897-201ENSMUST00000197860 128 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 AC117797.2-201ENSMUST00000224419 531 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 n-R5s196-201ENSMUST00000083136 117 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Gm26064-201ENSMUST00000083381 109 ntBASIC5.1□□□□□ -1.59
Ubfd1Q78JW9 Mir20a-201ENSMUST00000083508 107 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms