Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Gm2691-201ENSMUST00000203205 901 ntBASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Gm44162-201ENSMUST00000203543 544 ntBASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.4□□□□□ -1.71
Trim40Q3UWA4 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Gm45874-201ENSMUST00000212423 346 ntBASIC4.4□□□□□ -1.71
Trim40Q3UWA4 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.4□□□□□ -1.71
Trim40Q3UWA4 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.4□□□□□ -1.71
Trim40Q3UWA4 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Gm25810-201ENSMUST00000082752 108 ntBASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Mir133b-201ENSMUST00000083546 119 ntBASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim40Q3UWA4 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm3943-201ENSMUST00000118606 718 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm14871-201ENSMUST00000119056 194 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm15785-201ENSMUST00000119145 694 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm11510-201ENSMUST00000120278 347 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm13867-201ENSMUST00000120844 395 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm14776-201ENSMUST00000121029 887 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm15279-201ENSMUST00000155593 288 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm22968-201ENSMUST00000157955 118 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm27960-201ENSMUST00000183445 184 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Mir6400-201ENSMUST00000184870 92 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm2497-201ENSMUST00000189539 601 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm10925-201ENSMUST00000189941 678 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm5842-201ENSMUST00000195073 622 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm43054-201ENSMUST00000199495 884 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm7721-201ENSMUST00000200446 546 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm32453-201ENSMUST00000204183 456 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm6230-201ENSMUST00000208077 780 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 AC122332.1-201ENSMUST00000214384 285 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 AC167202.1-201ENSMUST00000219027 331 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Trim40Q3UWA4 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm23692-201ENSMUST00000101881 160 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm8595-201ENSMUST00000118250 630 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm12988-201ENSMUST00000119054 478 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm11790-201ENSMUST00000119569 455 ntBASIC4.38□□□□□ -1.71
Trim40Q3UWA4 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms