Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm4617-201ENSMUST00000178993 331 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm23379-201ENSMUST00000180026 107 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm27887-201ENSMUST00000184367 102 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm28740-201ENSMUST00000186142 215 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm18426-201ENSMUST00000191874 973 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm43096-201ENSMUST00000196173 421 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Mir6516-201ENSMUST00000196236 110 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm42814-201ENSMUST00000199370 460 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm44580-201ENSMUST00000206333 877 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm34783-201ENSMUST00000209159 303 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm19921-201ENSMUST00000210505 703 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm45874-201ENSMUST00000212423 346 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 AC119573.1-201ENSMUST00000227960 757 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm36927-201ENSMUST00000192504 1841 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm26078-201ENSMUST00000104067 128 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm24230-201ENSMUST00000104313 129 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm13614-201ENSMUST00000117306 503 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm14981-201ENSMUST00000117325 943 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm11737-201ENSMUST00000118713 468 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm11708-201ENSMUST00000119530 832 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm13508-201ENSMUST00000121639 775 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Snrpert-201ENSMUST00000121967 279 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Mir3080-201ENSMUST00000175010 79 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm23806-201ENSMUST00000175157 109 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm29534-201ENSMUST00000187328 382 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm9245-201ENSMUST00000200528 983 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm4874-201ENSMUST00000203589 691 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm44404-201ENSMUST00000203979 636 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm30155-201ENSMUST00000223458 339 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 AC158521.1-201ENSMUST00000225295 660 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm23330-201ENSMUST00000082660 164 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usp39Q3TIX9 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms