Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Lig3P97386 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.28□□□□□ -1.56
Lig3P97386 Gm44261-201ENSMUST00000203337 209 ntBASIC5.28□□□□□ -1.56
Lig3P97386 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.28□□□□□ -1.56
Lig3P97386 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC5.28□□□□□ -1.56
Lig3P97386 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.28□□□□□ -1.56
Lig3P97386 Gm19073-201ENSMUST00000219978 555 ntBASIC5.28□□□□□ -1.56
Lig3P97386 AC158631.2-201ENSMUST00000219999 478 ntBASIC5.28□□□□□ -1.56
Lig3P97386 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.28□□□□□ -1.56
Lig3P97386 CU024892.1-201ENSMUST00000224869 515 ntBASIC5.28□□□□□ -1.56
Lig3P97386 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lig3P97386 AC183096.1-201ENSMUST00000226392 130 ntBASIC5.28□□□□□ -1.56
Lig3P97386 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Lig3P97386 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lig3P97386 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lig3P97386 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Lig3P97386 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lig3P97386 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lig3P97386 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lig3P97386 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.28□□□□□ -1.56
Lig3P97386 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Lig3P97386 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.28□□□□□ -1.56
Lig3P97386 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lig3P97386 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lig3P97386 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lig3P97386 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lig3P97386 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lig3P97386 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lig3P97386 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Lig3P97386 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
Lig3P97386 Gm14711-201ENSMUST00000117056 217 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm14628-201ENSMUST00000117508 635 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm13771-201ENSMUST00000117988 238 ntBASIC5.27□□□□□ -1.57
Lig3P97386 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm25318-201ENSMUST00000122554 314 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm25103-201ENSMUST00000122671 318 ntBASIC5.27□□□□□ -1.57
Lig3P97386 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm16250-201ENSMUST00000148974 256 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.27□□□□□ -1.57
Lig3P97386 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lig3P97386 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lig3P97386 Gm28118-201ENSMUST00000185957 294 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm21856-201ENSMUST00000187547 696 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC5.27□□□□□ -1.57
Lig3P97386 Gm6140-201ENSMUST00000192494 966 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm9134-201ENSMUST00000193186 551 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm37272-201ENSMUST00000193401 488 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm37641-201ENSMUST00000193837 239 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm18382-201ENSMUST00000194394 582 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.27□□□□□ -1.57
Lig3P97386 Gm7443-201ENSMUST00000206355 378 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm44820-201ENSMUST00000207420 396 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC5.27□□□□□ -1.57
Lig3P97386 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lig3P97386 Gm45651-201ENSMUST00000210857 335 ntBASIC5.27□□□□□ -1.57
Lig3P97386 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.27□□□□□ -1.57
Lig3P97386 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lig3P97386 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.27□□□□□ -1.57
Lig3P97386 AC164629.1-201ENSMUST00000220250 1113 ntBASIC5.27□□□□□ -1.57
Lig3P97386 AC126554.4-201ENSMUST00000221055 409 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC5.27□□□□□ -1.57
Lig3P97386 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.27□□□□□ -1.57
Lig3P97386 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.27□□□□□ -1.57
Lig3P97386 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.27□□□□□ -1.57
Lig3P97386 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.27□□□□□ -1.57
Lig3P97386 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lig3P97386 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lig3P97386 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lig3P97386 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lig3P97386 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lig3P97386 Olfr881-201ENSMUST00000074611 948 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lig3P97386 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lig3P97386 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.27□□□□□ -1.57
Lig3P97386 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.27□□□□□ -1.57
Lig3P97386 AC154313.1-201ENSMUST00000217755 3841 ntBASIC5.27□□□□□ -1.57
Lig3P97386 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.27□□□□□ -1.57
Lig3P97386 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lig3P97386 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lig3P97386 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.26□□□□□ -1.57
Lig3P97386 AC115034.1-201ENSMUST00000215393 3846 ntBASIC5.26□□□□□ -1.57
Lig3P97386 AC156632.1-201ENSMUST00000220626 3845 ntBASIC5.26□□□□□ -1.57
Lig3P97386 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Lig3P97386 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lig3P97386 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lig3P97386 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.26□□□□□ -1.57
Lig3P97386 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Lig3P97386 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Lig3P97386 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Lig3P97386 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Lig3P97386 Gm22468-201ENSMUST00000116680 120 ntBASIC5.26□□□□□ -1.57
Lig3P97386 Gm26248-201ENSMUST00000116700 121 ntBASIC5.26□□□□□ -1.57
Lig3P97386 Gm26137-201ENSMUST00000116701 121 ntBASIC5.26□□□□□ -1.57
Lig3P97386 Gm26190-201ENSMUST00000116704 121 ntBASIC5.26□□□□□ -1.57
Lig3P97386 Gm24617-201ENSMUST00000116705 121 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 121.3 ms