Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
H3f3aP84244 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.03□□□□□ -1.76
H3f3aP84244 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.03□□□□□ -1.76
H3f3aP84244 Gm21856-201ENSMUST00000187547 696 ntBASIC4.03□□□□□ -1.76
H3f3aP84244 Gm21735-201ENSMUST00000190360 696 ntBASIC4.03□□□□□ -1.76
H3f3aP84244 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.03□□□□□ -1.76
H3f3aP84244 Gm38221-201ENSMUST00000195146 365 ntBASIC4.03□□□□□ -1.76
H3f3aP84244 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.03□□□□□ -1.76
H3f3aP84244 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.03□□□□□ -1.76
H3f3aP84244 AC105169.1-201ENSMUST00000218912 1294 ntBASIC4.03□□□□□ -1.76
H3f3aP84244 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
H3f3aP84244 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.03□□□□□ -1.76
H3f3aP84244 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
H3f3aP84244 Gm25821-201ENSMUST00000093657 133 ntBASIC4.03□□□□□ -1.76
H3f3aP84244 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
H3f3aP84244 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
H3f3aP84244 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
H3f3aP84244 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
H3f3aP84244 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
H3f3aP84244 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
H3f3aP84244 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
H3f3aP84244 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
H3f3aP84244 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.03□□□□□ -1.76
H3f3aP84244 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
H3f3aP84244 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
H3f3aP84244 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
H3f3aP84244 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
H3f3aP84244 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
H3f3aP84244 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
H3f3aP84244 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Gm8051-201ENSMUST00000120464 466 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
H3f3aP84244 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.02□□□□□ -1.77
H3f3aP84244 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
H3f3aP84244 Zakit-201ENSMUST00000157677 308 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Gm16114-201ENSMUST00000161930 300 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Trbv10-201ENSMUST00000168322 289 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.02□□□□□ -1.77
H3f3aP84244 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Gm2622-201ENSMUST00000200018 471 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Gm44259-201ENSMUST00000204996 298 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
H3f3aP84244 Gm44523-201ENSMUST00000205616 417 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Gm45392-201ENSMUST00000210441 214 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC4.02□□□□□ -1.77
H3f3aP84244 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.02□□□□□ -1.77
H3f3aP84244 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
H3f3aP84244 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
H3f3aP84244 Gm7117-201ENSMUST00000071515 387 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
H3f3aP84244 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
H3f3aP84244 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.02□□□□□ -1.77
H3f3aP84244 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
H3f3aP84244 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.02□□□□□ -1.77
H3f3aP84244 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
H3f3aP84244 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
H3f3aP84244 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.01□□□□□ -1.77
H3f3aP84244 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
H3f3aP84244 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
H3f3aP84244 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
H3f3aP84244 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
H3f3aP84244 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
H3f3aP84244 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
H3f3aP84244 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
H3f3aP84244 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
H3f3aP84244 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
H3f3aP84244 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
H3f3aP84244 Gm23014-201ENSMUST00000104144 130 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Gm26312-201ENSMUST00000157769 165 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Gm16545-201ENSMUST00000161968 463 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
H3f3aP84244 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
H3f3aP84244 Gm23925-202ENSMUST00000188429 132 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.01□□□□□ -1.77
H3f3aP84244 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.01□□□□□ -1.77
H3f3aP84244 Gm44376-201ENSMUST00000197570 128 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Gm6051-201ENSMUST00000201529 352 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Gm44757-201ENSMUST00000206373 157 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Gm45610-201ENSMUST00000209227 784 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Gm45651-201ENSMUST00000210857 335 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
H3f3aP84244 Gm17779-201ENSMUST00000213395 394 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
H3f3aP84244 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.01□□□□□ -1.77
H3f3aP84244 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
H3f3aP84244 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
H3f3aP84244 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms